PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON77372.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 274aa MW: 30914.5 Da PI: 6.6252 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.2 | 2.5e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l ++k +G g+W+ +++ g++R++k+c++rw++yl PON77372.1 14 RGAWTALEDKILTAYIKAHGEGQWRNLPKRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 26.9 | 1.1e-08 | 67 | 104 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+++++k+lG++ ++ gRt++++k++w++ PON77372.1 67 RGNISHDEEELIIRLHKLLGNR--------LP-GRTDNEIKNYWNTT 104 78999***************99........**.************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MGRSPCCSKE GLNRGAWTAL EDKILTAYIK AHGEGQWRNL PKRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SHDEEELIIR LHKLLGNRLP GRTDNEIKNY WNTTLGKKIA KSEPSSPSQE 120 NKSTLAEQTA KTRGLSDSAA AADHRSKVIR TRASRCTRVV IPNPVTLSVP IENTPATAVP 180 PLCHVDHHHH FTNQSPKNSD VDEEVYYSEV HDQVHYYQGT DHDHDHEVET VTTGIFGNGD 240 ILNDWPVVPS INFLEDDDAI FDLDSLLLDS DEWP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16720.1 | 4e-56 | MYB family protein |