PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON77287.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NF-YC

Protein Properties

Length: 237aa MW: 25625.7 Da PI: 4.8448

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON77287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	179.3	3.6e-56	51	155	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdflvdiv PON77287.1 51 QLQMFWSYQrqeIEQVNDFKNHHLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIV 149 89***998899********************************************************************************** PP NF-YC 97 prdelk 102 prde+k PON77287.1 150 PRDEIK 155 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MDGSTANNNN SSSGPSGVTA QPPQTSPYPL AGVPAGASAP FHHLLQQQQQ QLQMFWSYQR 60 QEIEQVNDFK NHHLPLARIK KIMKADEDVR MISAEAPILF AKACELFILE LTIRSWLHAE 120 ENKRRTLQKN DIAAAITRTD IFDFLVDIVP RDEIKDEAAL GGMVGDTASG VPYYYPPMGQ 180 PAGAPGGMMI GRPAVDPTGV YVQPPSQAWQ SVWQTTADDG SYGSGGGSGQ GNLDGQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	130	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	5e-89	NF-YC family protein