PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON77200.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 354aa    MW: 39460.1 Da    PI: 6.7906
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON77200.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.81.9e-08178225455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i  ++  L++l+P +     +K   Ka +L + ++Y++sLq
  PON77200.1 178 SHSLAERVRREKISVRMKMLQKLVPGC-----EKvTGKALMLDEIINYVQSLQ 225
                 8*************************9.....67699***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MASFSDPHHP VVLDSIFLSN NTPIYEISGL LDQEENNNNS INNNGVSQFY PSDLTVHGVH  60
ESSCLYHSSK VALSDNEPSV TKKQSTESST VVDKLESGEQ VTQKVTPMEK KRKNKNGSSS  120
SSAQSKDARG KKQRNCGDSM TKEEKKVKSN KNDQKKGQEE PPTGYIHVRA RRGQATDSHS  180
LAERVRREKI SVRMKMLQKL VPGCEKVTGK ALMLDEIINY VQSLQNQVEF LSMKLASLNL  240
LFYDFGMDLD AFMVRPEGLN LNTLASQIPS VPPCSQSQPI AFTTYTTNGA ATNFPITANN  300
NYPLLDNSAS LLLQQGERPS TAFSHDNGTL LWDMEDHRQN FLNPFEFDNL CSFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110148KKRKNKNGSSSSSAQSKDARGKKQRNCGDSMTKEEKKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.23e-53bHLH family protein