PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON76794.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ARF

Protein Properties

Length: 696aa MW: 75229.5 Da PI: 6.7276

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON76794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.4	1.5e-24	125	226	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+++ae++ ++ + t++ +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF +++++e PON76794.1 125 FAKTLTQSDANNGGGFSVPRHCAETIfppldyeADPPVQ--TVVARDVHGQEWKFRHIYRGTPRRHLLTTGWSTFVNNKKLVAGDSIVFL--KTDSGEI 219 89**************************995444444..9*********************************************..669999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ PON76794.1 220 YVGIRRA 226 ****997 PP
2	Auxin_resp	106.1	4e-35	291	374	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a++ a+ +++FevvY+P+ast+ F+vk++ v++a++++++ G+Rfkmafetedss+ ++ +Gtv++v+ +d+++WpnS+Wr+L+ PON76794.1 291 AVTLAARGQPFEVVYYPSASTAAFCVKASAVKAAMRIQWCSGTRFKMAFETEDSSRVSWfMGTVASVQVADQIHWPNSPWRLLE 374 678899***************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 696 aa Download sequence
MRERAGGERN RLDYRLWQAC AGRLVQVPPV NSAAFYFPQG HAEHSHANGV HFSAAVAGIG 60 VPAIIPCRVA AVDLMASSET DEVFAKIRLV PLMRNEEVDL DDDGGAAIGG GGGGLEGNPE 120 KPTYFAKTLT QSDANNGGGF SVPRHCAETI FPPLDYEADP PVQTVVARDV HGQEWKFRHI 180 YRGTPRRHLL TTGWSTFVNN KKLVAGDSIV FLKTDSGEIY VGIRRAKRGG GGGGGGHDSG 240 SGWNYGNCVS SFGRFSHEEK KLARNGYGGG GGGGGNMRGM GKIRPEAVIE AVTLAARGQP 300 FEVVYYPSAS TAAFCVKASA VKAAMRIQWC SGTRFKMAFE TEDSSRVSWF MGTVASVQVA 360 DQIHWPNSPW RLLEVTWDEP DLLQNVKCIN PWLVELANMP VIQFSSFSPR KKLRLHQQSD 420 FTLEGGQFPV PSILGNTLGP SSPLCYPPDN TPAGIQGARH VLFGVSISDL PLNSNLQSGT 480 FPSNVQHLNQ HSGIIPNGVM TGQTHSSESL SCLLTTESSG QNLEKSETPK KQQFVLFGQH 540 IVIEQKSCSS PPAASPPSDA VSQVLSGKDT GDGNTDTEKS PPNDSGPTLQ ASGYDLNIDH 600 CNVFLDSEDL GVTLDLSDLR SYEEFYRLLA KMFAIERSQM LNSVLYHDAT GVPKRIEDEP 660 FSDFMKTAKR LTIVTDSGSK NTRTMILPLT GPRSQG

Sequence ? help Back to Top

Protein Sequence Length: 696 aa Download sequence

MRERAGGERN RLDYRLWQAC AGRLVQVPPV NSAAFYFPQG HAEHSHANGV HFSAAVAGIG  60
VPAIIPCRVA AVDLMASSET DEVFAKIRLV PLMRNEEVDL DDDGGAAIGG GGGGLEGNPE  120
KPTYFAKTLT QSDANNGGGF SVPRHCAETI FPPLDYEADP PVQTVVARDV HGQEWKFRHI  180
YRGTPRRHLL TTGWSTFVNN KKLVAGDSIV FLKTDSGEIY VGIRRAKRGG GGGGGGHDSG  240
SGWNYGNCVS SFGRFSHEEK KLARNGYGGG GGGGGNMRGM GKIRPEAVIE AVTLAARGQP  300
FEVVYYPSAS TAAFCVKASA VKAAMRIQWC SGTRFKMAFE TEDSSRVSWF MGTVASVQVA  360
DQIHWPNSPW RLLEVTWDEP DLLQNVKCIN PWLVELANMP VIQFSSFSPR KKLRLHQQSD  420
FTLEGGQFPV PSILGNTLGP SSPLCYPPDN TPAGIQGARH VLFGVSISDL PLNSNLQSGT  480
FPSNVQHLNQ HSGIIPNGVM TGQTHSSESL SCLLTTESSG QNLEKSETPK KQQFVLFGQH  540
IVIEQKSCSS PPAASPPSDA VSQVLSGKDT GDGNTDTEKS PPNDSGPTLQ ASGYDLNIDH  600
CNVFLDSEDL GVTLDLSDLR SYEEFYRLLA KMFAIERSQM LNSVLYHDAT GVPKRIEDEP  660
FSDFMKTAKR LTIVTDSGSK NTRTMILPLT GPRSQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein