PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON76790.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GATA
Protein Properties Length: 314aa    MW: 35518 Da    PI: 9.3059
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON76790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.52.1e-19221254134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C++C +t+Tp+WR+gp g+ktLCnaCG++yr+ +
  PON76790.1 221 CTHCEVTNTPQWREGPLGPKTLCNACGVRYRSGR 254
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MVYSLDFDGA PKDFFDILDF PLEDVEMGPD RDDWTDMQFY DLPLDFSEGF STGFVGGVKN  60
DCPKETRPNI NLPNSYDNAC RLKEFPSASA GDILRSLDSF DSKHGRLFKT SSPVSILEST  120
SSCFGENQKP VYQKFIPVKR ARTKRSRSRR SNFNQLCSIF SHSEFSSSPK SNHLEPDSRT  180
FHTGKMFKPA VKRPFRTKKT MFHVSGVENF NFEEQSTTKR CTHCEVTNTP QWREGPLGPK  240
TLCNACGVRY RSGRLFPEYR PAASPTFVPS VHSNSHKKVL EMRGKASQST NSIRAGVELC  300
CRSQSGKSVR QLIV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1144149KRSRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.22e-41GATA family protein