PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON76762.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 566aa MW: 60698.6 Da PI: 5.3813

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON76762.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.2	7.1e-09	382	430	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq PON76762.1 382 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 430 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MDMGEKDKFE LDNKNEDAMN YSPGMSSDWR FDGSNLTNTS MGFVTAGNSM AIGKGDVIGS 60 SACSSASMVD SFVPTMWDHP SNPQNLGFCD MNVQNNASTL NALGIRKGSP ASLRTGIDRT 120 LDMCWNQSGP MLKGAMFLPN MPGMLPQSLS QLPTDSAFIE RAARFSCFNG GNFSDTVNPF 180 AIPESMSLYS RGGGMMQGVQ DVLAGSGLKP VLSGVHSQKG ELNVSEASKD ASLTVEHGAS 240 EGSPLKNERS ENLAKSHDEA KQFVGGSGNE SDEAEFSNGA GGGQEEPSMI EGAGGEPSAK 300 VHSSKKRKRN GQDSDPDQAK GASQQHGEST KDNTEQHQKG DQNPSTTNNK TTAKHGKQGS 360 QGSDPPKEEY IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCS KVTGKAVMLD 420 EIINYVQSLQ RQVEFLSMKL ATVNPRLDFN IEGLLAKDML QSRVGSSSSL AFSPDMPMPY 480 PTLQPPQQGL IQAGLSGMGG SSDVLRRAIS SQLMPLAGGY KEPSQLPNVW EDELNNVVQM 540 SFGTRTPPNS QDVDGSLPTG QMKVEL

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MDMGEKDKFE LDNKNEDAMN YSPGMSSDWR FDGSNLTNTS MGFVTAGNSM AIGKGDVIGS  60
SACSSASMVD SFVPTMWDHP SNPQNLGFCD MNVQNNASTL NALGIRKGSP ASLRTGIDRT  120
LDMCWNQSGP MLKGAMFLPN MPGMLPQSLS QLPTDSAFIE RAARFSCFNG GNFSDTVNPF  180
AIPESMSLYS RGGGMMQGVQ DVLAGSGLKP VLSGVHSQKG ELNVSEASKD ASLTVEHGAS  240
EGSPLKNERS ENLAKSHDEA KQFVGGSGNE SDEAEFSNGA GGGQEEPSMI EGAGGEPSAK  300
VHSSKKRKRN GQDSDPDQAK GASQQHGEST KDNTEQHQKG DQNPSTTNNK TTAKHGKQGS  360
QGSDPPKEEY IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCS KVTGKAVMLD  420
EIINYVQSLQ RQVEFLSMKL ATVNPRLDFN IEGLLAKDML QSRVGSSSSL AFSPDMPMPY  480
PTLQPPQQGL IQAGLSGMGG SSDVLRRAIS SQLMPLAGGY KEPSQLPNVW EDELNNVVQM  540
SFGTRTPPNS QDVDGSLPTG QMKVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-133	bHLH family protein