PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON76651.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C3H
Protein Properties Length: 370aa    MW: 40518.2 Da    PI: 7.66
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON76651.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.73.6e-07137157526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                  C+ f++ G Ck Gd+C FaHg
  PON76651.1 137 ACPEFRK-GNCKSGDSCEFAHG 157
                 7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MMIGEPTRLN PTVQIPTWDP YDDPTAGVAF PFSVTSPSVN VNGNVATGDY SPFLDSFASL  60
HRYLPSNEFV PGESDSLSEE SDAHVDAFSC DHFRMFEFKV RRCARGRSHD WTECPFAHPG  120
EKARRRDPRK HNYSGTACPE FRKGNCKSGD SCEFAHGVFE CWLHPARYRT QPCKDGLSCR  180
RRVCFFAHTP EQLRVLPNQS PRTSGSGESF DGSPIRHAYD SYLAKGGFVS SPTSILTSPP  240
VSPPSDSPPA SPNSPQIGVG SFNSASELVV SMRSLQLGKI KLGSSPWGFQ MGSGFGSPRG  300
GSMLRPGLCN VPSTPTRDPI TPRLGSVDLW DQSCEEEPAM ERVESGRNIR AKMYAKLSRE  360
NSLGRVDSAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-114C3H family protein