PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON76224.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | Trihelix | ||||||||
Protein Properties | Length: 660aa MW: 72359.5 Da PI: 5.4309 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 91.3 | 9.9e-29 | 42 | 126 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r+++ k+plW+evs+k++e g++rs+k+Ckek+en+ k++k+ikeg+ ++ ++ +t+++fdqlea PON76224.1 42 RWPRQETLALLKIRSDMDVAFRDASVKGPLWDEVSRKLAELGYHRSAKKCKEKFENVFKYHKRIKEGRTGK--PDGKTYRFFDQLEA 126 8********************************************************************95..77779*******85 PP | |||||||
2 | trihelix | 107.2 | 1.1e-33 | 475 | 560 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k evl+Li++r++++ +++++ k+plWee+s++mr+ g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a PON76224.1 475 RWPKAEVLTLIKLRTNLDAKYQENGPKGPLWEEISAAMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 560 8*********************************************************************8.99***********85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 660 aa Download sequence |
MLGDSSSTGL GSSSGGDAAA AAAVGGGEDF LTGTDRSFGG NRWPRQETLA LLKIRSDMDV 60 AFRDASVKGP LWDEVSRKLA ELGYHRSAKK CKEKFENVFK YHKRIKEGRT GKPDGKTYRF 120 FDQLEALENQ LFSTTTSSPP PPPPATAAAQ PKAQAQALAM QAVAVVTTTT AAMANTNSNP 180 LLPQNSTVPS ISTTTIPSQA TIMNLALQSS FQAAPTNPTV LPVPPQPLAA VPLATTATNP 240 TFSSAAAAAE LRSISADLAS NSMTTSSMSS DEEMGEEESG GGGRRKRKRK WKDFFERLMK 300 EVIQRQEEQQ KKFLEAVEKR EHERMVREEA WRMQEMSRIN REREILAQER SIAAVKDAAV 360 MSFLQKISEQ QNQNPEAAAA AAAAANINIP QPTPIIQPVQ STPPPPQPQP STAAAAAAPP 420 PLPPRAVQPV IQNIENVLKS GHNTNNNNNG SNSNSNNNNN NTNNNFMAGS ASSSRWPKAE 480 VLTLIKLRTN LDAKYQENGP KGPLWEEISA AMRKLGYNRN AKRCKEKWEN INKYFKKVKE 540 SNKKRPEDSK TCPYFHQLDA LYREKNKYFD PAAVGQFAKP ENSVPLMVQP EQQWPPAAVA 600 PPSGDRSRAV EMERLDQMDH DEDEEEDEEE DEDDDEEDEE GGNNYELVAN KPASTVNAAE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 284 | 289 | RRKRKR |
2 | 284 | 290 | RRKRKRK |
3 | 285 | 290 | RKRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76880.1 | 1e-65 | Trihelix family protein |