PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON76118.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 368aa MW: 42114 Da PI: 9.9387

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON76118.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.2	1.2e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW eEd ll +vkq+G++ W++++++m+ ++R +k+c +rw +yl PON76118.1 4 RQRWRSEEDALLRAYVKQYGPREWNLVSQRMNtpLNRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.4	1.2e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + PON76118.1 59 KGSLTEEEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MKERQRWRSE EDALLRAYVK QYGPREWNLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENNKTADP 120 IEEGKYDRIL ETFAEKLVKD RPAPGYHLMA TSNGGFINTD HPNSSPAPTL LPPWLSNSNG 180 TSGVRPPSPS VTLSLASSTV AATSPPIPWL QQERGGVPDT AATLVMGNLP STHASIPAAC 240 GENLIMSELA ECCRELDEGH RAWAAHKKEA AWRLRRVELQ LESEKACRRR EKMEEIEAKV 300 KALREEQKVA LERIEAEYRE QLVGLRRDAE AKEQKLAEQW TAKHMRLSKF LEQMGCRTCR 360 HADQPNSR

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MKERQRWRSE EDALLRAYVK QYGPREWNLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENNKTADP  120
IEEGKYDRIL ETFAEKLVKD RPAPGYHLMA TSNGGFINTD HPNSSPAPTL LPPWLSNSNG  180
TSGVRPPSPS VTLSLASSTV AATSPPIPWL QQERGGVPDT AATLVMGNLP STHASIPAAC  240
GENLIMSELA ECCRELDEGH RAWAAHKKEA AWRLRRVELQ LESEKACRRR EKMEEIEAKV  300
KALREEQKVA LERIEAEYRE QLVGLRRDAE AKEQKLAEQW TAKHMRLSKF LEQMGCRTCR  360
HADQPNSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-164	MYB family protein