PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON75765.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HB-other

Protein Properties

Length: 539aa MW: 60576.6 Da PI: 6.6845

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON75765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.9	4.9e-20	19	74	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR+ t++q+ +Le+++++++yp++e++ eLA++lgLte+q++ WF+ rR k+k+ PON75765.1 19 KKRRLKTPSQVMALEKFYNEHKYPTEEMKSELAEQLGLTEKQISGWFCHRRLKDKR 74 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MEESSEAHSE EKKASQDNKK RRLKTPSQVM ALEKFYNEHK YPTEEMKSEL AEQLGLTEKQ 60 ISGWFCHRRL KDKRLSRDET CANGRQDRLS GVIQDLGSGL GQDSCGSTKH VDYRHVDPRE 120 VESQRLYGHD FPAADLITDN RSHYTERVSG MDDTSSESSS SLQDRFISQT EDPHSMETSR 180 YIIQDGPIAP LSSRGTRNMG YKPSGYLKVK GEIENAAITA VKRQLGRQYQ EDGPPLGVEF 240 EPLPPGAFES PIRDPIHEPY YVGNPVLSHS PDISGVKRQT SPSTRYEVHN SKLSSRDSYL 300 QEASGFLQGV NHQEAKPGNQ SKQKSTYIGH TSSFPGRHSS LDKYDDSTYN TNRSHKKISK 360 HGVEGMASDS FLNHHGHYGG KLASRQALSS AQEDDDVNHH GHYGGKIARR QALSSAHEDD 420 EISPEIVQRS EYLKFKPSRS TQNYFEAPDV EERGISTMIA QEDKFIGEGK VRKDVKVKMK 480 HVNEMTVAKR VRADFSREEN VTSSFAEMLP RKNHTKGSAL EMPSSFSEDE TAETSSSED

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MEESSEAHSE EKKASQDNKK RRLKTPSQVM ALEKFYNEHK YPTEEMKSEL AEQLGLTEKQ  60
ISGWFCHRRL KDKRLSRDET CANGRQDRLS GVIQDLGSGL GQDSCGSTKH VDYRHVDPRE  120
VESQRLYGHD FPAADLITDN RSHYTERVSG MDDTSSESSS SLQDRFISQT EDPHSMETSR  180
YIIQDGPIAP LSSRGTRNMG YKPSGYLKVK GEIENAAITA VKRQLGRQYQ EDGPPLGVEF  240
EPLPPGAFES PIRDPIHEPY YVGNPVLSHS PDISGVKRQT SPSTRYEVHN SKLSSRDSYL  300
QEASGFLQGV NHQEAKPGNQ SKQKSTYIGH TSSFPGRHSS LDKYDDSTYN TNRSHKKISK  360
HGVEGMASDS FLNHHGHYGG KLASRQALSS AQEDDDVNHH GHYGGKIARR QALSSAHEDD  420
EISPEIVQRS EYLKFKPSRS TQNYFEAPDV EERGISTMIA QEDKFIGEGK VRKDVKVKMK  480
HVNEMTVAKR VRADFSREEN VTSSFAEMLP RKNHTKGSAL EMPSSFSEDE TAETSSSED

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	19	24	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	1e-92	HB-other family protein