PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON75564.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 759aa    MW: 85510.7 Da    PI: 5.2613
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON75564.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS363.33.5e-1113837561373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL+ cA+avs++d + a++lL+++++++sp gd  qRla++f+++L+arla++++++     ++  s+ + s+ l+a++l    +P+ k++ + aN
  PON75564.1 383 LRTLLILCAQAVSADDRRTANQLLKQIRQHSSPLGDGSQRLAHCFANGLEARLAGTGTGTQLY-YSTLLSNVKASDILKAYQLHLSSCPFKKMAIVFAN 480
                 5789***************************************************65555433.33444446799************************ PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 ++I++ +e+++ +Hi+Df+i +G+QWp L+q L++R++gpp+lRiTg++ p++g   +e++eetg+rL+k++e++gvpfe+n+++++++e++++e++++
  PON75564.1 481 KMIMKVAEKATSLHIVDFGILYGFQWPILIQHLSKRAGGPPKLRITGIEFPQKGfrPAERIEETGRRLEKYCERFGVPFEYNAIASQKWETIQVEDIKI 579
                 *****************************************************9******************************999************ PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E++aVn+ ++ ++llde+v+++ +r+ vL+l+++++P ++v +  + ++ns+ F++rf eal ++salfd l+++++re+eer + E+e+ gre++
  PON75564.1 580 DSNEVVAVNCLMRFKHLLDETVEVNCPRNVVLNLIRKMNPAIFVQSIANGSYNSPFFVTRFREALFHFSALFDVLDTNISRENEERLMFEKEFYGREAM 678
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 nv+aceg er+er et++ W+ r  +aGF+++pl+++ +   +  l+k + + + ++e s+++++gWk+r + + S+W
  PON75564.1 679 NVIACEGLERVERPETYKLWQVRNLRAGFQSLPLNQELMGAFREKLKKWYHKDFVIDEYSDWMLQGWKGRIVHASSCW 756
                 **************************************************888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 759 aa     Download sequence    
MIMDPSFNEF PDFTNGFKIE NQTIFPNSNE YNFNRLSPDF EFLDNSLNLY APPPDPDPGT  60
FIPTPSIDVS SVRESPFPST TEGVDGGSST PPSSVSPDGD SSSDENEFSE TVFKYINSIL  120
MEENMEEKPH MFYDPLDLQV TEKSFYDALG ERYPYSPNQS QIDQKAETPD SVFSGSSSEY  180
GGSSTSTSTS TSNSASGPQL VTDLGDHKPS SLQSSLPVDN NFQFDFLMAQ NLFRDSDSIS  240
MFQRGVEEAS KFLPKSNQLV IDLESHKFSH ELKGEAVTVK VEKENSPNGS KGRKNHERED  300
PDLEEERSNK QSAIYVDESE LSDLFDRVLL HTDHGCKQRG ETESGKSEAS NNSQPNKQAA  360
GSNANGGKAR GKKQGKKKET VDLRTLLILC AQAVSADDRR TANQLLKQIR QHSSPLGDGS  420
QRLAHCFANG LEARLAGTGT GTQLYYSTLL SNVKASDILK AYQLHLSSCP FKKMAIVFAN  480
KMIMKVAEKA TSLHIVDFGI LYGFQWPILI QHLSKRAGGP PKLRITGIEF PQKGFRPAER  540
IEETGRRLEK YCERFGVPFE YNAIASQKWE TIQVEDIKID SNEVVAVNCL MRFKHLLDET  600
VEVNCPRNVV LNLIRKMNPA IFVQSIANGS YNSPFFVTRF REALFHFSAL FDVLDTNISR  660
ENEERLMFEK EFYGREAMNV IACEGLERVE RPETYKLWQV RNLRAGFQSL PLNQELMGAF  720
REKLKKWYHK DFVIDEYSDW MLQGWKGRIV HASSCWVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein