PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON75128.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | FAR1 | ||||||||
Protein Properties | Length: 251aa MW: 29451.1 Da PI: 6.6732 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 80.9 | 2.2e-25 | 77 | 167 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY Y++++GF+vr++++++s+ n+ ++ ++fvCskeg+re++ +++ + + tr gC a+l+v +++ +kw+vtk+ +eHnH+l+ PON75128.1 77 EFYIVYGRHTGFTVRIHHNRRSRINNMVIGQDFVCSKEGFREKKYACrKDRVLPPPPITREGCPAMLRVALRDGEKWVVTKFTEEHNHSLM 167 6*****************************************998772233334899********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MESTSSQSFD SDESERCLQI ESYDEHVLVD DEITEQVDLC TDGVHRSVKQ SNESLPIGNT 60 VRPYIGMEFQ SRDDAREFYI VYGRHTGFTV RIHHNRRSRI NNMVIGQDFV CSKEGFREKK 120 YACRKDRVLP PPPITREGCP AMLRVALRDG EKWVVTKFTE EHNHSLMSPS KVPWRGSGKN 180 MITEDEKDRR IRELTLELSN ERQRCKRRCA AYQEQLRMIL KDIEHHTDHL SKRVQDIVQK 240 IKELENEDSD I |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 202 | 207 | RQRCKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 3e-38 | FAR1 family protein |