PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON75074.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 569aa MW: 61704.4 Da PI: 6.8422

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON75074.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28	3.8e-09	378	425	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PON75074.1 378 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 425 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MENDFFLNAG LAPLLHFEHS NQIPNWQAVS GPLETQAMEL NCSSERSPEY GFYNPTWEKS 60 TADQSAQFDS ALSSMVSSPV ASNTNVSNES FVIRELIGKL GSIGNSGEIS PHSQPFLTTG 120 SSLPAPGVPY IAGNNSANTS CYSTPLNSPP KMNLEKIPGF RKSVAAVNST VAEFSADPGF 180 AERAARFSCF GSRSFNGRTT QLGSINSELN HNRSSPLMAH GKLSRVSSSP SLKALGSQIP 240 IPENRNSPPL QDRTGFTANS QEESTVSEQN PIGETGQRPS NETNSRKRKA ASKGKSKEPA 300 PSTKVAEVND NSNAKRSKQT ESSSNGNDNA SAKTEEETKG NNSNATGDEK QAKTSPKPPE 360 PPKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK ALMLDEIINY 420 VQSLQRQVEF LSMKLASVNT RLDANMDTLM SKDIFQPNSS LPHPIFPVDT SAQAIYGHQH 480 QQNSALHSGI SNGPMTHCSM DPLDTALCQN LPMQLPQLNG FTELVSQYPA FGEDDLQSLV 540 QMGFGQNPTR ETSLQPNGPN QVSHMKVEL

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MENDFFLNAG LAPLLHFEHS NQIPNWQAVS GPLETQAMEL NCSSERSPEY GFYNPTWEKS  60
TADQSAQFDS ALSSMVSSPV ASNTNVSNES FVIRELIGKL GSIGNSGEIS PHSQPFLTTG  120
SSLPAPGVPY IAGNNSANTS CYSTPLNSPP KMNLEKIPGF RKSVAAVNST VAEFSADPGF  180
AERAARFSCF GSRSFNGRTT QLGSINSELN HNRSSPLMAH GKLSRVSSSP SLKALGSQIP  240
IPENRNSPPL QDRTGFTANS QEESTVSEQN PIGETGQRPS NETNSRKRKA ASKGKSKEPA  300
PSTKVAEVND NSNAKRSKQT ESSSNGNDNA SAKTEEETKG NNSNATGDEK QAKTSPKPPE  360
PPKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK ALMLDEIINY  420
VQSLQRQVEF LSMKLASVNT RLDANMDTLM SKDIFQPNSS LPHPIFPVDT SAQAIYGHQH  480
QQNSALHSGI SNGPMTHCSM DPLDTALCQN LPMQLPQLNG FTELVSQYPA FGEDDLQSLV  540
QMGFGQNPTR ETSLQPNGPN QVSHMKVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-123	bHLH family protein