PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON74872.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 211aa    MW: 24094.5 Da    PI: 6.8111
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON74872.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.61.3e-091562655
                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                 ++E++RR++++  +++L +llP++    sk  l+  +   +A++YIksL+
  PON74872.1 15 RIVEKNRRNQMKVLYSKLNSLLPPQ---ISKEaLTLPDQIDEAINYIKSLE 62
                689*********************9...66666****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MDQGSQSSVT KIERRIVEKN RRNQMKVLYS KLNSLLPPQI SKEALTLPDQ IDEAINYIKS  60
LETKVKKSKD KKKSLLGGTK KRSYSSTFSD NMIMTTGSLR SPKIEIHEMG SVLEIVLITG  120
QDNQFIFYEV IRILHEERAD VVNAKFSVLG DSIFHVVHAE IADSIFAFGA TKISERLKRF  180
VSGSSSDVEL QADDDQHWWN DFEIHPEMLE F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.16e-32bHLH family protein