PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON74210.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family NF-YA
Protein Properties Length: 320aa    MW: 35283.2 Da    PI: 9.3432
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON74210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.71.7e-32157213158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy++Il+RRq+Rakle ekk  +k rkpylheSRh+hA+rR+Rg+gGrF
  PON74210.1 157 EEPVYVNAKQYHGILRRRQSRAKLELEKKA-IKVRKPYLHESRHQHAMRRARGCGGRF 213
                 69***************************9.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MPAKAEHEDR RPQHRADNVF QAGVYAQPWW REMATNAAIR ESPSKSSFVE NANGRPDDGA  60
NFQKEIAATI ASQSDGTNGS EHRVKTVPSS TALTVGEHLD PNSQMELVGH SIVLTPYPYA  120
DPNYGGVLTP YGPQAMVPPQ LYGMYPGRMP LPLEMEEEPV YVNAKQYHGI LRRRQSRAKL  180
ELEKKAIKVR KPYLHESRHQ HAMRRARGCG GRFLNTKRLD DNVASSTSEK VTTSDGNQST  240
HSTSGWNVDS SGNQKEGPGS KDEDMGKMQT LSNENGKSNG HGLSSTFDLR FSDSKEGDYM  300
GRGRKGMMLN GSTHGAIPIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.23e-40NF-YA family protein