PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON73808.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 262aa MW: 28754.5 Da PI: 8.3481

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON73808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.4	4.6e-12	74	120	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++Lr+l+P + +K++Ka+ L +++ +k+L PON73808.1 74 KNHSEAERRRRERINAHLATLRSLVPCN-----EKMDKATLLAEVISQVKEL 120 58***********************9.....8********99988887 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MASYSFSNSS YGSDYSSLFD PFPHGPGGFS GVLRGGSVVP HSLVLDSKRG ELVKAPARVG 60 KKGVSEAKAL AALKNHSEAE RRRRERINAH LATLRSLVPC NEKMDKATLL AEVISQVKEL 120 KKNAAEASQG LLIPEDKDEV QIEPYYDNGE GNANFLFKAY LCCGYRPELL TDVRQALDAL 180 PLKMVRTEIS TLGDRLKISF VFTCFNENNN DAETCRTLAS SVQETLSSVL DKASALAEYS 240 PRTTLPCKRR RISYFDSSSS SS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	85	ERRRRE
2	248	252	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	2e-32	bHLH family protein