PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON73805.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 157aa MW: 17876.3 Da PI: 7.3376 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 127.4 | 6.6e-40 | 5 | 104 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C++dC+++pyfp+++p++fa+vh++FGasnv k+l++lp++ r +a++s+ +eA++r++ PvyG+vg+i++l+q++++++++la++++ PON73805.1 5 RCAACKYLRRSCPSDCIFSPYFPSNDPQRFACVHRIFGASNVGKMLQRLPPDLRAEAADSMHFEAKCRIEFPVYGCVGIISQLHQEIQNVETQLAKTRA 103 6**********************************************************************************************9998 PP DUF260 100 e 100 e PON73805.1 104 E 104 7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 157 aa Download sequence |
MISGRCAACK YLRRSCPSDC IFSPYFPSND PQRFACVHRI FGASNVGKML QRLPPDLRAE 60 AADSMHFEAK CRIEFPVYGC VGIISQLHQE IQNVETQLAK TRAEIALITS SNNTIQEAQL 120 RDDQYYSSLN NNFMQPQHTN IIGQYDQMAF NNSSWML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G26660.1 | 2e-53 | LBD family protein |