PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON73529.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 546aa MW: 60578.2 Da PI: 7.4988

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON73529.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.6	1.9e-12	349	394	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+++P+ +++Ka+ L Av YIk+L PON73529.1 349 NHVEAERQRREKLNHRFYALRSVVPNV-----SRMDKASLLADAVVYIKEL 394 799*********************6.....4**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MEELMSPSCS SSILVPLSQD ITPTIQERLL FIFQNRPEWW VYAIFWQAHN KDLNNNNNSS 60 RVVLSWCDGH FRGHKNAAAV SKTGGLDFEI ISKKSTARVF SEEEEMDVDR LVNGGGGSGA 120 DVNDIWWFYT VSLTRSFGAG ILGHAFSSGE YVWLRGGQDL EFNQCDRVKE ARMHGVQTLV 180 CVATPNGVLE LGSSDLIKED WSLIQMAKSL FARLSTNNYS NNTVPRLQGN NHDHPHHPHH 240 QNRNQSPISV RDIPFLDIGI PTHYSGARND RSTALTLPKR TDHEANLIEL SGTAGTGTGS 300 SSDSGPSDSD TGRTATGDGK FIVKKRGRKA AATTTTTTMM ESPAPPVVNH VEAERQRREK 360 LNHRFYALRS VVPNVSRMDK ASLLADAVVY IKELKAKVEE LEGKLVIEAQ SNKYLHMRPR 420 NGNTMASTIT RNTTNKIDYY SSQFSSSVEQ KRQISSYGSM VAAAGAMEVD VKMLGSAAMI 480 RVQCPDVNYP SARLMNAVRD LEFQIIHVSI SSVKELLFQD VLVRIDPDRF PTEEAMRSAI 540 VGIMQS

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MEELMSPSCS SSILVPLSQD ITPTIQERLL FIFQNRPEWW VYAIFWQAHN KDLNNNNNSS  60
RVVLSWCDGH FRGHKNAAAV SKTGGLDFEI ISKKSTARVF SEEEEMDVDR LVNGGGGSGA  120
DVNDIWWFYT VSLTRSFGAG ILGHAFSSGE YVWLRGGQDL EFNQCDRVKE ARMHGVQTLV  180
CVATPNGVLE LGSSDLIKED WSLIQMAKSL FARLSTNNYS NNTVPRLQGN NHDHPHHPHH  240
QNRNQSPISV RDIPFLDIGI PTHYSGARND RSTALTLPKR TDHEANLIEL SGTAGTGTGS  300
SSDSGPSDSD TGRTATGDGK FIVKKRGRKA AATTTTTTMM ESPAPPVVNH VEAERQRREK  360
LNHRFYALRS VVPNVSRMDK ASLLADAVVY IKELKAKVEE LEGKLVIEAQ SNKYLHMRPR  420
NGNTMASTIT RNTTNKIDYY SSQFSSSVEQ KRQISSYGSM VAAAGAMEVD VKMLGSAAMI  480
RVQCPDVNYP SARLMNAVRD LEFQIIHVSI SSVKELLFQD VLVRIDPDRF PTEEAMRSAI  540
VGIMQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	3e-37	bHLH family protein