PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON73510.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | NAC | ||||||||
Protein Properties | Length: 447aa MW: 50535 Da PI: 6.4644 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 163.6 | 7.3e-51 | 15 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi+evd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s + PON73510.1 15 VPPGFRFHPTEEELLHYYLRKKVAFEKIDL-DVIREVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYS-G 111 69****************************.9***************964444222455**************************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +gl+ktLvfykgrap+g+k+dW+mheyrl PON73510.1 112 FKRIGLRKTLVFYKGRAPHGQKSDWIMHEYRL 143 999***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 447 aa Download sequence |
MSEDMNLSIN GQSQVPPGFR FHPTEEELLH YYLRKKVAFE KIDLDVIREV DLNKLEPWDI 60 QEKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKIIYS GFKRIGLRKT 120 LVFYKGRAPH GQKSDWIMHE YRLDETTTHD STAVSNPMVA DSLSEDGWVV CRVFKKKNYQ 180 KSVDSPKGAT SAMSVDSNMS HPHPHHLHQM PLNPRNDGVL DQILLYMGRT CKLENESLTN 240 TISADRFLAT NKSSATVAGS GDTVFHQNFM HLPRLHEESP TNNNNNSTLH SLPLNDSVSP 300 FKAYNNNSGC FDQSMEYDML LDTEPSSSDR RSEDQKPGNR VNDWVALDRL VASQLNGQDH 360 DQDTSKQLSC GFGDIQNVMS FCTPPPADDE DDVVQLSYPY LRSGTGTNTR ISNLHNHQNY 420 SENDLWSFAR SSSSPSSSSD PLCHLSV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32770.1 | 1e-100 | NAC family protein |