PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON72680.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

TCP

Protein Properties

Length: 490aa MW: 52851.5 Da PI: 8.2081

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON72680.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	117.8	1.3e-36	86	248	2	134
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................ssssasec.... 73 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a ai el+++ +++sa+ + PON72680.1 86 SGGKDRHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLINAASDAIAELPSLnssfpdtpkqlsdekrasggterGFESAQ-Veldg 183 689*************************************************************98888888887777777766666333332.13455 PP TCP 74 eaesssssasnsssgkaaksaakskksqksaasalnlak.esr...akarararertrekmrikn 134 ++++ + ++++++++ + +++a+s+ s++s+ s l+l++ e r kar+rarer ++++ ++n PON72680.1 184 DQGNYQHQDQQQNQHLSLSKSACSSTSETSKGSGLSLSRsEIRgnrVKARERARERAAKEKEKEN 248 55555555555566666666667777777777777777742224449999999997766665554 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MEAEEIQAQA CRFPRIGNGR SDSSSKLLGQ KGGNDHYPDD EEDGRELKRV GGGGGGATDV 60 SLVNGGANRL RGWHHSSRII RVSRASGGKD RHSKVWTSKG LRDRRVRLSV TTAIQFYDLQ 120 DRLGYDQPSK AVEWLINAAS DAIAELPSLN SSFPDTPKQL SDEKRASGGT ERGFESAQVE 180 LDGDQGNYQH QDQQQNQHLS LSKSACSSTS ETSKGSGLSL SRSEIRGNRV KARERARERA 240 AKEKEKENES RIVHQHHQNM NISPNSTFTE LLTTGISNAN SSSNNNNASS PPASTQQNPG 300 PGGGAGTHMD YFASGLLGLS SSSRTHHQSS GFSGQIHLGN SLPQQTMSMP PYSVVSGDHN 360 QAETLQHFSF VPEHYIPVAT SQTNGNGGDY NLNFSISSGL AGFNRGTLQS NSPSLLPHLQ 420 RFTPIDGSHV PFFIGAAAAA AASSAPQMEN HHHHNHNLNH QFPAGLFDGR LQLCYGDGSR 480 QSDQKGKGKN

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MEAEEIQAQA CRFPRIGNGR SDSSSKLLGQ KGGNDHYPDD EEDGRELKRV GGGGGGATDV  60
SLVNGGANRL RGWHHSSRII RVSRASGGKD RHSKVWTSKG LRDRRVRLSV TTAIQFYDLQ  120
DRLGYDQPSK AVEWLINAAS DAIAELPSLN SSFPDTPKQL SDEKRASGGT ERGFESAQVE  180
LDGDQGNYQH QDQQQNQHLS LSKSACSSTS ETSKGSGLSL SRSEIRGNRV KARERARERA  240
AKEKEKENES RIVHQHHQNM NISPNSTFTE LLTTGISNAN SSSNNNNASS PPASTQQNPG  300
PGGGAGTHMD YFASGLLGLS SSSRTHHQSS GFSGQIHLGN SLPQQTMSMP PYSVVSGDHN  360
QAETLQHFSF VPEHYIPVAT SQTNGNGGDY NLNFSISSGL AGFNRGTLQS NSPSLLPHLQ  420
RFTPIDGSHV PFFIGAAAAA AASSAPQMEN HHHHNHNLNH QFPAGLFDGR LQLCYGDGSR  480
QSDQKGKGKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	2e-42	TCP family protein