PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON72476.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 326aa    MW: 36655.3 Da    PI: 6.4364
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON72476.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.91.8e-08158198954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PON72476.1 158 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 198
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MDINNHTAYY NNKLITNNSS SAAYWDLQTA AMEHHHNILH TPHHHHHHHE IPTTDHSSLW  60
PNYPNLQHQT PSSSASSSSS TLLMITREHH NHHVVLEDHK EDQDDPADDD DDQEELGAMK  120
EMMYKIAAMQ PVDIDPASIR KPKRRNVRIS DDPQSVAARH RRERISERIR ILQRLVPGGT  180
KMDTASMLDE AIRYVKFLKR QIRLLQSNDH DHDHIRRRQP PPQQQQQQQQ QQGLVLISST  240
STNNCTSTTT QPCLASSGDI NWGAQGQYGS LLTTGPPGFG NFSGGGGGSG TSLLGEAFCN  300
MGFDHDQGKE EGPGEREREE EGVMIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09750.11e-40bHLH family protein