PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON72380.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 278aa    MW: 31153.7 Da    PI: 4.9826
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON72380.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.86.1e-3058116259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+v+rs++d +++++tY+++Hnh+
  PON72380.1  58 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVDRSKTDASMLIVTYTSSHNHP 116
                 699***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MDSTSLSPKL DSDAEKDQLE GESQASKKRK VVVEKKVVTV RIETTNVVGK VKNEGPPSDF  60
WSWRKYGQKP IKGSPYPRGY YRCSTSKGCS AKKQVDRSKT DASMLIVTYT SSHNHPGPDM  120
IISNKTSTDH LETQVAQLKE VPHKENATIS SQDHDHDHDQ QCTQPVDVCD ELDAFHYIQS  180
SPVRCSQDIV MDLKEEDPFM GKLEKTCDTT LGFVLNEEPV CTGLISHSQV TCLSTTPKSE  240
EENDFFDELE ELSISSSFTS FMRSCYFSSE MSFPVVPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.16e-34WRKY family protein