PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON72254.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

LBD

Protein Properties

Length: 186aa MW: 20055.5 Da PI: 6.7706

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON72254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	146.9	5.5e-46	10	108	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv+kll++lp+++reda++sl+yeAear+rdPvyG+vg i+ lq+q+++l++el+++++ PON72254.1 10 PCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELPPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANA 108 7*********************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MASSSSYNSP CAACKFLRRK CMPGCIFAPY FPPEEPQKFA NVHKIFGASN VTKLLNELPP 60 HQREDAVNSL AYEAEARVRD PVYGCVGAIS FLQRQVQRLQ KELDAANADL IRFACSEIPT 120 TDHLAPPPPS PPPIHPVIGP RQGGGGGFYN QPSHGGFSLP YSLPWNDQSR DINEGGEGGG 180 GGEGHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63090.2	4e-74	LBD family protein