PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON71544.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GATA
Protein Properties Length: 334aa    MW: 36588.7 Da    PI: 6.1191
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON71544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.91.3e-18251285135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs+Cg+ kTp+WR gp g ktLCnaCG+++++ +l
  PON71544.1 251 CSHCGVQKTPQWRTGPLGAKTLCNACGVRFKSGRL 285
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MECVEGALKT SFRKEMAMKP APQAVFDDLL GLNGQNGVSS DDFFVDDLLN FSNEDEPEVV  60
EEEQEEEEHK GLASAFPLKP HKTEPVQENS NPTSTSFSPN DEFGPVPTTE LSVPADELAN  120
LEWLSHFVED SFSEFSTPYL AGVSTEKPKN PTGKQHQEPE RSVPEKPCSK ARSKRARTGG  180
RVWSLGSPSF TESSSSSTSS SSSSPSCSWF VYPTQNPDPA GSVEKPPAKK PKKKPSLDFS  240
GPGMGQPTRR CSHCGVQKTP QWRTGPLGAK TLCNACGVRF KSGRLLPEYR PACSPTFSSE  300
LHSNHHRKVL EMRRKKENVT GPESGFEPPV VPSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.23e-78GATA family protein