PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON71533.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

SRS

Protein Properties

Length: 374aa MW: 40333.9 Da PI: 6.8934

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON71533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	225.5	1e-69	156	302	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkele 101 g++sCqdCGnqakkdC+h+RCRtCCksrg+dC+thvkstWvpa+krrerqqq+ ++ ++++ + ++++kr r++ ++ +ss++l ++++++ le PON71533.1 156 GGGVSCQDCGNQAKKDCVHMRCRTCCKSRGYDCQTHVKSTWVPASKRRERQQQHLSSLQQQQ--QLQQQPKRLRDN--NNPLMISSSRL-QTNTSSGLE 249 5789*********************************************998887755553..355566666665..44444555554.55566799 PP DUF702 102 tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + ++P+evss+avfrcvrvss++d+++++aYqtav+igGhvfkGiLyd+G+e+ PON71533.1 250 VGNFPAEVSSPAVFRCVRVSSIEDNDDQYAYQTAVNIGGHVFKGILYDHGPET 302 ***************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MAGFFSLGSS TSAPPAAAGG RGSTQEEDDD NNNNQNQPPT GIAAPPHNPE TFFWYNVKNS 60 DNHDQRHHQH QNHHTTTTFE LWQQEQQQAA LLHLQTRAHH HHQDLYSSAA ALGVGPSSYR 120 SGGTGGASIT VDSSDDLHSS SARFMMMRSS SSGGGGGGVS CQDCGNQAKK DCVHMRCRTC 180 CKSRGYDCQT HVKSTWVPAS KRRERQQQHL SSLQQQQQLQ QQPKRLRDNN NPLMISSSRL 240 QTNTSSGLEV GNFPAEVSSP AVFRCVRVSS IEDNDDQYAY QTAVNIGGHV FKGILYDHGP 300 ETTNYNMAGE TSSGGGGGNQ VQPLDLITVA ATATAAGTTV TEATPSAAFD PSSLYPPPLN 360 TYIAGTQFFL PPRS

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MAGFFSLGSS TSAPPAAAGG RGSTQEEDDD NNNNQNQPPT GIAAPPHNPE TFFWYNVKNS  60
DNHDQRHHQH QNHHTTTTFE LWQQEQQQAA LLHLQTRAHH HHQDLYSSAA ALGVGPSSYR  120
SGGTGGASIT VDSSDDLHSS SARFMMMRSS SSGGGGGGVS CQDCGNQAKK DCVHMRCRTC  180
CKSRGYDCQT HVKSTWVPAS KRRERQQQHL SSLQQQQQLQ QQPKRLRDNN NPLMISSSRL  240
QTNTSSGLEV GNFPAEVSSP AVFRCVRVSS IEDNDDQYAY QTAVNIGGHV FKGILYDHGP  300
ETTNYNMAGE TSSGGGGGNQ VQPLDLITVA ATATAAGTTV TEATPSAAFD PSSLYPPPLN  360
TYIAGTQFFL PPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	7e-69	SRS family protein