PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON71267.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HB-other

Protein Properties

Length: 1137aa MW: 128523 Da PI: 7.6435

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON71267.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	42.7	9.3e-14	10	59	8	57
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 t+ q+e+L +l+ +n+yp++ e+e+ A+ +gLt +q++ WF rR +ek+ PON71267.1 10 TPVQIEALDKLYLENKYPTQMEMEDCAATVGLTYKQIQCWFVERRRREKR 59 899**********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1137 aa Download sequence
MKSMEIKRKT PVQIEALDKL YLENKYPTQM EMEDCAATVG LTYKQIQCWF VERRRREKRE 60 NAITIPLHST STEKLTICGG QNSLGIAARK VVKRSSSSKH QEISAVKNTI VQDLFTPDYI 120 LKRVFRKDGP PLGVEFDSLP SEELFHCKDP GNSYPSCKEN QRAAKKKKVS KHGVINTVCN 180 DQNAPAKHGM GKGLMTVWRA TNPHAGDFPT GVDFANEATG ISSIRKSGSL NPPVQARKPL 240 KQNIPTKQGR LRNKLQEKKK HYAKRREVES YKDANQKQTD RTKCELALEG GDSQENFHQI 300 SMLMDDEELE VRELQAVPNR PGCSGHLTTG LKGCSLCKDL LVKFPPNSVK MKQPISMQPW 360 ESSPEIVKKL FKVLHFVYTY SLDIDVCTFT LDEFAQAFHD KDSLLLGKIH VALLKLLLYD 420 IKVELNNESL PHLNKSYNYL ALLHSVENQE FSLEFWGRSL NPLTWTEILR QVLVASGFGS 480 KQIAIRKESL DKEMHLMVKY GLRPGTLKGE LFKILLEQGN NGLKVSDLAK SYPIVDLKLA 540 STTEELECLI CSMLSSDITL FEKISSTAYR LRINSVLKKV EELQSDSEDS GAVDDGLSDS 600 DTYSSDEDSR CDVVKSSLSK VKNLNCQKSK SKISNDYTEI DESHPGESWL LGLLEGEYSD 660 LSIEEKLNAM VALIDLLRAG SRMRMEEPPK TIAECVPSIH HSSSGAKIKR SSAKHQNLLV 720 SSLGHLGQIQ GIKEAYAYWN YHAIDSSASI SKYHERSFDK EKYAKDTEMW AGVHPMQSVF 780 LGSDRRYNRY WLFLGPCNAN DPGHRRVYFE SSDDGHWEII DTKEALCALL LVLDDRGKRE 840 ALLIESLEKR QAKLCETMSS RMLNSNGSGH LTHFNQFDLT IVREDSYSPV SDVENNLTMI 900 DVTCDSLPSS GAIVIEVGNK GEELKHKWCR LQAFDSWIWS SFYLGLNAVK HGKRSYFDSL 960 TRCECCHDLF WRDEKHCRVC HTTFEIDFDQ EERYAIHKAT CMAKEATDMF PKVLSSQIQS 1020 LKAAIYAIES VMPEDALVGA WTKSAHKLWV KRLRRTSSLQ ELMQVLADFI GAINENWLCR 1080 CTAMPSSYDG EEIIACFTTL PQTTSAVALC KKSLSKVKGK SYDSIVEPCR SMQSIFC

Sequence ? help Back to Top

Protein Sequence Length: 1137 aa Download sequence

MKSMEIKRKT PVQIEALDKL YLENKYPTQM EMEDCAATVG LTYKQIQCWF VERRRREKRE  60
NAITIPLHST STEKLTICGG QNSLGIAARK VVKRSSSSKH QEISAVKNTI VQDLFTPDYI  120
LKRVFRKDGP PLGVEFDSLP SEELFHCKDP GNSYPSCKEN QRAAKKKKVS KHGVINTVCN  180
DQNAPAKHGM GKGLMTVWRA TNPHAGDFPT GVDFANEATG ISSIRKSGSL NPPVQARKPL  240
KQNIPTKQGR LRNKLQEKKK HYAKRREVES YKDANQKQTD RTKCELALEG GDSQENFHQI  300
SMLMDDEELE VRELQAVPNR PGCSGHLTTG LKGCSLCKDL LVKFPPNSVK MKQPISMQPW  360
ESSPEIVKKL FKVLHFVYTY SLDIDVCTFT LDEFAQAFHD KDSLLLGKIH VALLKLLLYD  420
IKVELNNESL PHLNKSYNYL ALLHSVENQE FSLEFWGRSL NPLTWTEILR QVLVASGFGS  480
KQIAIRKESL DKEMHLMVKY GLRPGTLKGE LFKILLEQGN NGLKVSDLAK SYPIVDLKLA  540
STTEELECLI CSMLSSDITL FEKISSTAYR LRINSVLKKV EELQSDSEDS GAVDDGLSDS  600
DTYSSDEDSR CDVVKSSLSK VKNLNCQKSK SKISNDYTEI DESHPGESWL LGLLEGEYSD  660
LSIEEKLNAM VALIDLLRAG SRMRMEEPPK TIAECVPSIH HSSSGAKIKR SSAKHQNLLV  720
SSLGHLGQIQ GIKEAYAYWN YHAIDSSASI SKYHERSFDK EKYAKDTEMW AGVHPMQSVF  780
LGSDRRYNRY WLFLGPCNAN DPGHRRVYFE SSDDGHWEII DTKEALCALL LVLDDRGKRE  840
ALLIESLEKR QAKLCETMSS RMLNSNGSGH LTHFNQFDLT IVREDSYSPV SDVENNLTMI  900
DVTCDSLPSS GAIVIEVGNK GEELKHKWCR LQAFDSWIWS SFYLGLNAVK HGKRSYFDSL  960
TRCECCHDLF WRDEKHCRVC HTTFEIDFDQ EERYAIHKAT CMAKEATDMF PKVLSSQIQS  1020
LKAAIYAIES VMPEDALVGA WTKSAHKLWV KRLRRTSSLQ ELMQVLADFI GAINENWLCR  1080
CTAMPSSYDG EEIIACFTTL PQTTSAVALC KKSLSKVKGK SYDSIVEPCR SMQSIFC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	52	57	ERRRRE
2	53	58	RRRREK
3	53	60	RRRREKRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-139	HB-other family protein