PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON71145.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 375aa MW: 41509.3 Da PI: 7.4588

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON71145.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	88.1	7.6e-28	203	263	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +D y+WrKYGqKe+ gs++pr+YYrCt++ +Cp+kk+v+r ++dp +++++Y+g+H+++ PON71145.1 203 EDNYTWRKYGQKEIMGSKYPRGYYRCTHQklyNCPAKKQVQRLDDDPFTFQVMYRGNHTCH 263 7**************************999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MLKSKTTNLN HKRKLHPDNM EEHNIVSLIL HGCKIVKELE SNLESLANQS NVLANYCDEI 60 AKVFGSAKER LRGHDHQGML DDHDQTRELL QQAQNNIDHA SFQEWLIRSS VCSYTQAMDI 120 NNTSTHPQAL LLGAETRDLS GHIRTTSAHE NRNMGRIEFL GSSSPSAPSS SSSQRPRRRK 180 DDHEIRIVNM AAPQIGNTDI PPEDNYTWRK YGQKEIMGSK YPRGYYRCTH QKLYNCPAKK 240 QVQRLDDDPF TFQVMYRGNH TCHMSATAPT SSLPLQAAIM SQEMAAEPLT SSTITSSVAI 300 GRWLSMEFSP AGVGGSSSHG GGAGTSASTK EMVEYPVLDM ADAMFNSGSS SSNSMDFLFP 360 SAEGKPRDSG NKKNA

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MLKSKTTNLN HKRKLHPDNM EEHNIVSLIL HGCKIVKELE SNLESLANQS NVLANYCDEI  60
AKVFGSAKER LRGHDHQGML DDHDQTRELL QQAQNNIDHA SFQEWLIRSS VCSYTQAMDI  120
NNTSTHPQAL LLGAETRDLS GHIRTTSAHE NRNMGRIEFL GSSSPSAPSS SSSQRPRRRK  180
DDHEIRIVNM AAPQIGNTDI PPEDNYTWRK YGQKEIMGSK YPRGYYRCTH QKLYNCPAKK  240
QVQRLDDDPF TFQVMYRGNH TCHMSATAPT SSLPLQAAIM SQEMAAEPLT SSTITSSVAI  300
GRWLSMEFSP AGVGGSSSHG GGAGTSASTK EMVEYPVLDM ADAMFNSGSS SSNSMDFLFP  360
SAEGKPRDSG NKKNA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	180	PRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40740.1	8e-56	WRKY family protein