PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON71144.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 367aa MW: 41352 Da PI: 5.167

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON71144.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	72.2	7e-23	149	209	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg +WrKYGqKe+ ++++pr+Y+rCt + gC+++++v++ +++pk+ ++tY geH+++ PON71144.1 149 EDGQAWRKYGQKEILNAQYPRAYFRCTRKydqGCRATRQVQQIQDNPKLYQTTYIGEHTCN 209 79***********************998899************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MGTCIWPENL SKRLMKELVQ GRDMATQLQI LLHKPFGEHG SVSAEELTRK ILNSFTETLS 60 VVMRYNNSTV NSTSNTNTIN GNISDQFSGG GGGDQVSQVN PCEEASHCDD RNSEDSGESK 120 RRSLFKDRRG CYKRRKNSQS RTTVSPTTED GQAWRKYGQK EILNAQYPRA YFRCTRKYDQ 180 GCRATRQVQQ IQDNPKLYQT TYIGEHTCNI MVKAPQMIKD SETWNCISNF KVITSDSSRI 240 IPNTSSSKAP TILMEQGEVV KEETPISDSL SDSLSLGNTE DLWPPELKDL ELSEPSMGLL 300 MSQKIMGSNH NGHDQDVVSI MFSFDHQDRT CTSASTTSHG LDMEVFVDKS MDFGNCDFEF 360 DETEFTL

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MGTCIWPENL SKRLMKELVQ GRDMATQLQI LLHKPFGEHG SVSAEELTRK ILNSFTETLS  60
VVMRYNNSTV NSTSNTNTIN GNISDQFSGG GGGDQVSQVN PCEEASHCDD RNSEDSGESK  120
RRSLFKDRRG CYKRRKNSQS RTTVSPTTED GQAWRKYGQK EILNAQYPRA YFRCTRKYDQ  180
GCRATRQVQQ IQDNPKLYQT TYIGEHTCNI MVKAPQMIKD SETWNCISNF KVITSDSSRI  240
IPNTSSSKAP TILMEQGEVV KEETPISDSL SDSLSLGNTE DLWPPELKDL ELSEPSMGLL  300
MSQKIMGSNH NGHDQDVVSI MFSFDHQDRT CTSASTTSHG LDMEVFVDKS MDFGNCDFEF  360
DETEFTL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	120	136	KRRSLFKDRRGCYKRRK
2	133	160	KRRKNSQSRTTVSPTTEDGQAWRKYGQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	9e-49	WRKY family protein