PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON70555.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

TCP

Protein Properties

Length: 358aa MW: 39685.6 Da PI: 9.2571

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON70555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	84.7	2.3e-26	64	191	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssaseceaesssssasns 85 g+kdrhsk+ T +g+RdRR+Rls+++a +++dLqd+LG+ ++sk i+WL+ + k i++l+ +++ a+ +e+++++ ++++ PON70555.1 64 GGKDRHSKVWTIRGLRDRRIRLSVQTAVQLYDLQDRLGLSQPSKVIDWLIDATKNDIDKLPPIqmpqgslllsqfhnhhTTTLATTFENKDHQHDDHQD 162 78*************************************************************777777777655444322222222555555555555 PP TCP 86 ssg.........................k 89 +++ + PON70555.1 163 GINqlfaqrffplssnplshpnslqngmS 191 55577766777766666643333322220 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MITNSREKAG FPAAKQEARD GGGDGGGEQL FKAPTSTTTS SSSRQWSSAG FRNPRIVRVS 60 RTFGGKDRHS KVWTIRGLRD RRIRLSVQTA VQLYDLQDRL GLSQPSKVID WLIDATKNDI 120 DKLPPIQMPQ GSLLLSQFHN HHTTTLATTF ENKDHQHDDH QDGINQLFAQ RFFPLSSNPL 180 SHPNSLQNGM SYEPSNDSLF SLSHHHQHHH HYHPQFGTSS SSSSGHGFSV PQMDSNANPS 240 SFSSSPLPVS QLFFSPPNST PSFYNPYPPP YNITTTTSSS TTSTPVLDHD HDHNHSTITS 300 TTTTSSSSQH VLFPYNSLIP SLHSVTNNST LKPSFPTLFN PKLLSQGGFQ NRPEKDHI

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MITNSREKAG FPAAKQEARD GGGDGGGEQL FKAPTSTTTS SSSRQWSSAG FRNPRIVRVS  60
RTFGGKDRHS KVWTIRGLRD RRIRLSVQTA VQLYDLQDRL GLSQPSKVID WLIDATKNDI  120
DKLPPIQMPQ GSLLLSQFHN HHTTTLATTF ENKDHQHDDH QDGINQLFAQ RFFPLSSNPL  180
SHPNSLQNGM SYEPSNDSLF SLSHHHQHHH HYHPQFGTSS SSSSGHGFSV PQMDSNANPS  240
SFSSSPLPVS QLFFSPPNST PSFYNPYPPP YNITTTTSSS TTSTPVLDHD HDHNHSTITS  300
TTTTSSSSQH VLFPYNSLIP SLHSVTNNST LKPSFPTLFN PKLLSQGGFQ NRPEKDHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	3e-45	TCP family protein