PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON70515.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ZF-HD
Protein Properties Length: 272aa    MW: 29323.2 Da    PI: 6.7529
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON70515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer941.3e-2957111358
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                   +rY+eC+kNhA +lGghavDGC+Efm++ geegt +al CaAC+CHRnFHR+e +
   PON70515.1  57 VIRYRECQKNHALKLGGHAVDGCCEFMAA-GEEGTLDALMCAACNCHRNFHRQECT 111
                  579*************************9.999*******************9965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MEFKEHEDQD QDQDQDEEME DIPAAPPGYD SSSARPRPGA GAGEGGASST NARKSVVIRY  60
RECQKNHALK LGGHAVDGCC EFMAAGEEGT LDALMCAACN CHRNFHRQEC TDGGGAASSS  120
VSADHHHNNY QLYHHGLGHQ FSSSPYYGRA APPGPSGYLH LTSPPAHPSR PPLALQGVSS  180
GGGGGGQSRE EGEDASIPSS SGGSGSRSKK RFRTKFTAEQ KEKMLEFAEM VGWRIQKHDD  240
AAVEQFCLET GVNRHVLKVW MHNNKHTLGK KP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-57ZF-HD family protein