PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON70380.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

TCP

Protein Properties

Length: 448aa MW: 47093 Da PI: 8.7066

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON70380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	120.1	2.6e-37	57	178	2	121
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa.ksk 98 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s ++s+s+ s++++ +s+ +++ PON70380.1 57 PPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRNSGSSMSAPSHFRSSYfNPN 155 789******************************************************************999888888888887777766666666777 PP TCP 99 ksqksaasalnlakesrakarar 121 + + aa+a+++ k +++++ra+ PON70380.1 156 SYHFGAAAASQFIKTTSSSSRAE 178 77777777788888777666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MIMEPENGIR SRPNFPLQLL EKKEEQAPCS TISGSSEPNP LRPGSALQLP EPPKKAPPKR 60 TSTKDRHTKV DGRGRRIRMP ATCAARVFQL TRELGHKSDG ETIEWLLQQA EPAVIAATGT 120 GTIPANFTSL NISLRNSGSS MSAPSHFRSS YFNPNSYHFG AAAASQFIKT TSSSSRAEWE 180 RSSAILMDES QQRRVLFSAG IGLLSSSSSS EVNSPSSSSS SSMMLNFNSG NVSNILQMKQ 240 ELRDQAAGLE AASAAAAAAA AEAEAGQRKR RQGLEQDLSP QQSAQNLMNS NNNNSNNYLL 300 QSSSGSLPAS HNPIPAAFWM LPNNSASNSN QLLAAAAAAG PVSGSHDPMW TFPNVSNTSN 360 MYRGPITSGL HFMNFPPVAL LPGQQLGSGA APGGGGGGGS DSHLGMLAAF NAYRPILGGG 420 AAESQVSGSH EHHGGDDGHD TTSTTSHR

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MIMEPENGIR SRPNFPLQLL EKKEEQAPCS TISGSSEPNP LRPGSALQLP EPPKKAPPKR  60
TSTKDRHTKV DGRGRRIRMP ATCAARVFQL TRELGHKSDG ETIEWLLQQA EPAVIAATGT  120
GTIPANFTSL NISLRNSGSS MSAPSHFRSS YFNPNSYHFG AAAASQFIKT TSSSSRAEWE  180
RSSAILMDES QQRRVLFSAG IGLLSSSSSS EVNSPSSSSS SSMMLNFNSG NVSNILQMKQ  240
ELRDQAAGLE AASAAAAAAA AEAEAGQRKR RQGLEQDLSP QQSAQNLMNS NNNNSNNYLL  300
QSSSGSLPAS HNPIPAAFWM LPNNSASNSN QLLAAAAAAG PVSGSHDPMW TFPNVSNTSN  360
MYRGPITSGL HFMNFPPVAL LPGQQLGSGA APGGGGGGGS DSHLGMLAAF NAYRPILGGG  420
AAESQVSGSH EHHGGDDGHD TTSTTSHR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	267	272	QRKRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	2e-55	TCP family protein