PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON70213.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HD-ZIP

Protein Properties

Length: 308aa MW: 34063.2 Da PI: 8.2879

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON70213.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.4	2.5e-18	139	193	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq +Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k PON70213.1 139 RKKLRLTKEQSLVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 193 78889************************************************98 PP
2	HD-ZIP_I/II	126.1	1.5e-40	139	228	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+keq+ +LEe+F+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l PON70213.1 139 RKKLRLTKEQSLVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVHELR-AL 228 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MAENDDGLGL SLSLGCGATQ PSLKLNLMQR PSPPMQYHHR KTTPWNEIFQ LSTDRNSDAR 60 SFLRGLDVNR TPPSATAVTA LAAADYDDEN GVSSPNSTVS SLSGKRSERE PVGDEIENER 120 DSCSRGSDDE DGGGGDNSRK KLRLTKEQSL VLEETFKEHN TLNPKQKLAL AKQLNLRPRQ 180 VEVWFQNRRA RTKLKQTEVD CEYLKRCCEN LTEENRRLQK EVHELRALKL SPQLYMHMSP 240 PTTLTMCPSC ERVAVSSSAS STAASSVPAS TGPNRQPAVP GIPRPVPINP WAALPIQHRP 300 LDTPASRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	144	SRKKLRL
2	188	196	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60390.1	4e-70	HD-ZIP family protein