PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON70124.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Protein Properties

Length: 440aa MW: 49520.6 Da PI: 6.6438

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON70124.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.8	3.5e-17	34	113	13	98
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++l +p+kf +++kk+ + ++++ + g +W+v + ++++ +++ GW eF++++gL e+D +vFk++g+s f v +f+ PON70124.1 34 DQQLAIPNKFS--NNLKKKLPEFVSIKGPGGGTWTVGV--ATNDDSLFFKHGWHEFASDHGLAENDLLVFKYSGESHF--GVLIFD 113 4679****7..5566778899***********..*******************************99888..777776 PP
2	B3	49.8	6e-16	312	406	3	98
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE- CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvfr 98 +++ps+v ++ + lp++ + ++ + ++++ l++ed ++W+ +++y++++++ lt+GW++F+ +n+L+e D++vF+ ++f l vk+fr PON70124.1 312 VIMKPSHVYTRFYVLLPNEWVMKYISLENQDLYLRFED---KEWRTRFNYNRRRRSAGLTSGWNHFAVDNNLEEFDVCVFEPGsPVnNSFCLDVKIFR 406 5799******************55545655555555...9*************************************54222477777788776 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MVESCLDCSK WAEEIYWAHF QDIHFSQFML SGFDQQLAIP NKFSNNLKKK LPEFVSIKGP 60 GGGTWTVGVA TNDDSLFFKH GWHEFASDHG LAENDLLVFK YSGESHFGVL IFDGQTLCEK 120 EFSYFVKRCG HKRDDHGGNL TKRKSRGTSC DETNNASSEN VGCTSVEKSR DDDGIWVQPG 180 EPVVTPTPEE KICRKSTVNS LLISSDYDGI VVPSREPVIT PTADKQVRGR ATSIRPIRAT 240 RSRHAASNGS PPCSGELVSI ADADHTPTKR IGTVYAMQYV SNRRPVSEDE KDYALQLAQA 300 EISEPNSQGL LVIMKPSHVY TRFYVLLPNE WVMKYISLEN QDLYLRFEDK EWRTRFNYNR 360 RRRSAGLTSG WNHFAVDNNL EEFDVCVFEP GSPVNNSFCL DVKIFRVVEE IAPPTAVASP 420 TSGNSRKKLI KSAREEQPSL

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MVESCLDCSK WAEEIYWAHF QDIHFSQFML SGFDQQLAIP NKFSNNLKKK LPEFVSIKGP  60
GGGTWTVGVA TNDDSLFFKH GWHEFASDHG LAENDLLVFK YSGESHFGVL IFDGQTLCEK  120
EFSYFVKRCG HKRDDHGGNL TKRKSRGTSC DETNNASSEN VGCTSVEKSR DDDGIWVQPG  180
EPVVTPTPEE KICRKSTVNS LLISSDYDGI VVPSREPVIT PTADKQVRGR ATSIRPIRAT  240
RSRHAASNGS PPCSGELVSI ADADHTPTKR IGTVYAMQYV SNRRPVSEDE KDYALQLAQA  300
EISEPNSQGL LVIMKPSHVY TRFYVLLPNE WVMKYISLEN QDLYLRFEDK EWRTRFNYNR  360
RRRSAGLTSG WNHFAVDNNL EEFDVCVFEP GSPVNNSFCL DVKIFRVVEE IAPPTAVASP  420
TSGNSRKKLI KSAREEQPSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	7e-70	B3 family protein