PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON70076.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

E2F/DP

Protein Properties

Length: 475aa MW: 52271.4 Da PI: 4.6162

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON70076.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.5	1.9e-27	149	214	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwkg PON70076.1 149 RYDSSLGLLTKKFINLIKQAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWKG 214 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MSGGGRAPSR PAPLPPPVAS GGAAQIVPPL RRHLAFTSTK PPFVPPDDYH RFSGDARRAA 60 DQEPEAIVVR SPLLKRKNAL ENNEVDRSDW TSSPGYINVV NSPMQTPVSA KGGRTYNRSK 120 GSKGNKSAPQ TPVSNAGSPS PLTPAGSCRY DSSLGLLTKK FINLIKQAED GILDLNKAAE 180 TLEVQKRRIY DITNVLEGIG LIEKKLKNRI RWKGLGASRP GEVDGDISLL QAEVENLNLE 240 ERRLDDRIRE MQERLRDLSE DETNQKWLFV TEEDIKGLPC FQNETLIAIK APHGTTLEVP 300 DPDEAVDYPQ RRYRIILRST MGPIDVYLVS QFEEKFEDVN GAEPPANFPI ASSSGSSEPT 360 VTEVVTVEST GTEIEPQEQQ DHQMCADINA SQEFTGGMMK IVPSDVDNDA DYWLISDAEV 420 SITDMWRTDS GVDWDGANML HPDFGMPDVS TPRPQTPPSG ITNVPPNTTV DFSQR

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MSGGGRAPSR PAPLPPPVAS GGAAQIVPPL RRHLAFTSTK PPFVPPDDYH RFSGDARRAA  60
DQEPEAIVVR SPLLKRKNAL ENNEVDRSDW TSSPGYINVV NSPMQTPVSA KGGRTYNRSK  120
GSKGNKSAPQ TPVSNAGSPS PLTPAGSCRY DSSLGLLTKK FINLIKQAED GILDLNKAAE  180
TLEVQKRRIY DITNVLEGIG LIEKKLKNRI RWKGLGASRP GEVDGDISLL QAEVENLNLE  240
ERRLDDRIRE MQERLRDLSE DETNQKWLFV TEEDIKGLPC FQNETLIAIK APHGTTLEVP  300
DPDEAVDYPQ RRYRIILRST MGPIDVYLVS QFEEKFEDVN GAEPPANFPI ASSSGSSEPT  360
VTEVVTVEST GTEIEPQEQQ DHQMCADINA SQEFTGGMMK IVPSDVDNDA DYWLISDAEV  420
SITDMWRTDS GVDWDGANML HPDFGMPDVS TPRPQTPPSG ITNVPPNTTV DFSQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-175	E2F/DP family protein