PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON69961.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 1025aa MW: 114285 Da PI: 7.7447 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 28.2 | 5e-09 | 250 | 307 | 23 | 81 |
trihelix 23 rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 +gk ++ + +ev+++++++g++r +k+ kw+n+ ++++k+ e+e++++ e++ +y PON69961.1 250 KGKTRADKDREVAEFLQRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQV-GKSY 307 4678888899*************************************9965555.3445 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 1025 aa Download sequence |
MGDKKGETTK KQQQQSKQQP QPQPQQQQQI SSSSPKDPIL DESTETTRPH HHHGHPHQQQ 60 STLVVSGASH IISAPLFIPS GATSSSPFDQ QFDQAATATA VVSTNPKRPR YTTGQWKLLP 120 SPSSQQKQTA QVTVLTGESS PVSAQQQPQL LLQSTAASSS DTASSPSHSL PSLSASGQDT 180 SKPDLAGENP IHQQFRKGKY VSPVWKPNEM LWLARAWRVQ YQGGSSPHNG SGSSSRVEPS 240 GTDHLGSQTK GKTRADKDRE VAEFLQRHGV NRDAKTAGTK WDNMLGEFRK VYEWERGGER 300 EQVGKSYFRL SPYERKLHRL PASFDEEVFE ELSQFMGSKM RTPQGRPGAG SLTVAGDPRS 360 LPGPPPSFKE DDQFPLSART TKQLIMGSAG EAFYYGGRGA LMGFESAVDI GGPSPPSISS 420 KELRRIGKIR MTWEESVSLW AEEGEHNKGR VKLQGSSFLN ADELTYLDDA MVACNMEAFE 480 EGPLRGFSVD RFVSGQQVKV FGRKKPFSVS ASGFPEKVQL PLAEPSVRST PPWEFQDPTD 540 YYVGCLRVPP PSIPTLFELS WYLQEPPPEE LRFPLRKDVY RDLPRGKDLF FTISNELLDC 600 RTLTYDILSP ILRTNPSVTS STSTSRDSFI GLWDDCINRV VSKFCSVGIV NVRKPTNNLS 660 STEVLQDQWP NVTGFVRGFC LWRGEETDQL REGQIDPSNS IVEKLLWTYQ DLPYILGYCA 720 VGFLVTFCAL SRGANQDRII RTDLQTLDLS SPSDRLKALV PCYRVASLLP LLADRCFNSV 780 NNIINVASSK MFPYSDFERL DMGNGNVTEI TPNTVTRFYP NRRKWAAVKE IYDFLDHRIP 840 HAEFIHHSSE KDLGLVFKPR GYSRPSRPTH IDQLVEALKC VTKALVALHD LSFMHRDLSW 900 DKVVRRVDRE NEWFVAGFEE AVVAPQIYPM MVQVAGTATE QVAARVSHAP EMERGLHGVK 960 VDVWGVGYLV RTCGVAGVPK MLRELQSRCL DQNPEQRPTA ADCYHHLLQL QSSLQSPTAS 1020 GVVLM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G33550.1 | 1e-07 | Trihelix family protein |