PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON69952.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 245aa MW: 28274 Da PI: 7.0367 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.5 | 2e-29 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 +rienk+nrqv+fskRrng+lKKA+ELSvLCdaev viifss+gkl e+ PON69952.1 9 ERIENKINRQVSFSKRRNGLLKKAYELSVLCDAEVGVIIFSSHGKLSEFG 58 69**********************************************95 PP | |||||||
2 | K-box | 74.7 | 2.5e-25 | 74 | 173 | 1 | 100 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 y++s++++ +a++l e+ kL++++e+Lqr Rh+lGe+Le+L lkeLq+Le++L + l++ R++ +++++e +eel++k ++l+e +++L+ kle PON69952.1 74 YASSQDNNIVGDEAQNLLLEIPKLQAKYESLQRAERHFLGENLEELGLKELQNLEKRLARTLSQARQRTMHMMVERLEELRRKVRDLEELHEQLKPKLE 172 6678888888888**********************************************************************************9998 PP K-box 100 e 100 e PON69952.1 173 E 173 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MGRGRVVLER IENKINRQVS FSKRRNGLLK KAYELSVLCD AEVGVIIFSS HGKLSEFGST 60 NVNTTLERYR QFCYASSQDN NIVGDEAQNL LLEIPKLQAK YESLQRAERH FLGENLEELG 120 LKELQNLEKR LARTLSQARQ RTMHMMVERL EELRRKVRDL EELHEQLKPK LEEVRNMCLC 180 IESQGDLNIV ADNKFKSDST QPNHIESEST ADKGPYTKFL SEETIADREG RITGVGSSRN 240 QDWFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 4e-44 | MIKC_MADS family protein |