PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON69764.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

AP2

Protein Properties

Length: 564aa MW: 62107.8 Da PI: 6.9734

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON69764.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.5	2.4e-11	177	233	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g PON69764.1 177 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 233 57*****************5444.2455536655.779999************98 PP
2	AP2	47	6.2e-15	278	327	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g PON69764.1 278 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 327 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MGSMNSNNWL SFPLSPTHPS LTSNLHTSQS HQFSLGLVND NMDNPFQNQA DWNLINSHSS 60 SEVPKVADFL GVTKSENQTD LVPFNEIHHQ ANDADYLFPH NSIVQTVQQT VNVAAASTNT 120 YDFQENPSNL QALTLSMGSG KGSSTCETSS DNISTNSTAA VEAAPRRTLD TFGQRTSIYR 180 GVTRHRWTGR YEAHLWDNSC RREGQSRKGR QGGYDKEEKA ARAYDLAALK YWGTSTTTNF 240 PISNYEKELE DMKHMTRQEF VASIRRKSSG FSRGASMYRG VTRHHQHGRW QARIGRVAGN 300 KDLYLGTFST EEEAAEAYDI AAIKFRGLNA VTNFDMNRYD VKSILESNTL PIGGGAAKRL 360 KEAQALESSR KREEMIALTS AYQYGSPGST SSGSNNRLQA FSLLQPPQAT SLIDMPHLSL 420 QNDMSHHYAN HHHHHHHHQD PSLVPQNYIQ TQLQLHQQQA NHHQFYANGY NSSNSIQNHP 480 AFLQGLVENI GTTSSVVDNS GNSGGSYNGG YSLGMASNSA AGNAEAELSL VKVDYDMPSG 540 GYGAWSGSGS GNGSNPGSFN MWND

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MGSMNSNNWL SFPLSPTHPS LTSNLHTSQS HQFSLGLVND NMDNPFQNQA DWNLINSHSS  60
SEVPKVADFL GVTKSENQTD LVPFNEIHHQ ANDADYLFPH NSIVQTVQQT VNVAAASTNT  120
YDFQENPSNL QALTLSMGSG KGSSTCETSS DNISTNSTAA VEAAPRRTLD TFGQRTSIYR  180
GVTRHRWTGR YEAHLWDNSC RREGQSRKGR QGGYDKEEKA ARAYDLAALK YWGTSTTTNF  240
PISNYEKELE DMKHMTRQEF VASIRRKSSG FSRGASMYRG VTRHHQHGRW QARIGRVAGN  300
KDLYLGTFST EEEAAEAYDI AAIKFRGLNA VTNFDMNRYD VKSILESNTL PIGGGAAKRL  360
KEAQALESSR KREEMIALTS AYQYGSPGST SSGSNNRLQA FSLLQPPQAT SLIDMPHLSL  420
QNDMSHHYAN HHHHHHHHQD PSLVPQNYIQ TQLQLHQQQA NHHQFYANGY NSSNSIQNHP  480
AFLQGLVENI GTTSSVVDNS GNSGGSYNGG YSLGMASNSA AGNAEAELSL VKVDYDMPSG  540
GYGAWSGSGS GNGSNPGSFN MWND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	0.0	AP2 family protein