PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON69754.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 436aa MW: 47555.7 Da PI: 6.633

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON69754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.8	1.6e-12	360	405	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ k + a++L +AveYIk+Lq PON69754.1 360 SIAERVRRTRISERMRKLQELVPNM----EKQTNTADMLDLAVEYIKDLQ 405 689*******************7....467***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MESDLQHPQQ MSSGPGLMRY RSAPSSYFTN MLDREFCQQF FNRPSSPETE RIFARFMNSG 60 GLDDTTAQKL SSETTQQTQF VTSPTMSNEA EAGAGAGAGA GAVAHQQQQQ QQSNLNSYSS 120 DSQSFNYHSQ SKPPLPNQSL GSSNEVSYSM GMNQFPPMRT GGLNNSTLIR HSSSPAGLFA 180 NINIEGLGAI RGMGSYGASS STNEEATFST PNKLKNFSSG PPPNASAGLL SPIDEIIDDK 240 TIVVNNLDGG AFGEGRGNNF VSSYPPLGSW DDSAIISDDV TGLKRLREED EKPFSRLNTN 300 LPSETQNVET LTRPPTVLAH HLSLPKTSSE MAAIEKFLQF QDSVPCKIRA KRGCATHPRS 360 IAERVRRTRI SERMRKLQEL VPNMEKQTNT ADMLDLAVEY IKDLQKQVQT LSDNRAKCTC 420 SNKASAAITR KDTEAS

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MESDLQHPQQ MSSGPGLMRY RSAPSSYFTN MLDREFCQQF FNRPSSPETE RIFARFMNSG  60
GLDDTTAQKL SSETTQQTQF VTSPTMSNEA EAGAGAGAGA GAVAHQQQQQ QQSNLNSYSS  120
DSQSFNYHSQ SKPPLPNQSL GSSNEVSYSM GMNQFPPMRT GGLNNSTLIR HSSSPAGLFA  180
NINIEGLGAI RGMGSYGASS STNEEATFST PNKLKNFSSG PPPNASAGLL SPIDEIIDDK  240
TIVVNNLDGG AFGEGRGNNF VSSYPPLGSW DDSAIISDDV TGLKRLREED EKPFSRLNTN  300
LPSETQNVET LTRPPTVLAH HLSLPKTSSE MAAIEKFLQF QDSVPCKIRA KRGCATHPRS  360
IAERVRRTRI SERMRKLQEL VPNMEKQTNT ADMLDLAVEY IKDLQKQVQT LSDNRAKCTC  420
SNKASAAITR KDTEAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	4e-71	bHLH family protein