PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON69564.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 724aa MW: 77429.8 Da PI: 6.2452

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON69564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.7	3.3e-16	464	510	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq PON69564.1 464 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 510 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 724 aa Download sequence
MPLSELYRLA KRRVDSNQDF EPGNDVFELV WENGQITTQG QPSRTRKEPT CNSLPSHCLP 60 SYTPKSRDKD IGYGTSSKTG KFGTVDSVVL NEIPMSVPSD EVGLSHDDVM MPWLNYPIDG 120 SLQHEYCPDF LPELSGVTVN DVSKSNNFAS NDKSSCSLLY RESNTNSVGY GASLEQRNGS 180 KIGSVVGGDV VRPRTGSSQL YPSSSQECQT SFPSFRSRVV DSIVDNTSSA ARHSVCSDSV 240 RVPSDGGFPS LKMQKKDTIP PSNSSNVINF SHFSRPAALV KANLQNIGTT TDSNVSSMER 300 IPIKDKGSAA NSNSPPKPVL IDSSSGLGKE TGTRCQIMPS GNDLKPSEAR PLEEPCAAKD 360 SEAVCQEDRA KNDINFSQIP CESATRALPD GEKNMEPIVA SSSVCSGNSV ERASDDPTHV 420 LKRKFRDTED SECHSEDVEE ESVGVKKTAL PRGAGSKRSR AAEVHNLSER RRRDRINEKM 480 RALQELIPNC NKVDKASMLD EAIEYLKTLQ LQVQIMSMGA GLCMPPMMLP AGMQHMHAPH 540 LAHFSSMGVG MGMGMGMGFG MGIPDMNGGS SGYPMIQVPP VQGAHFPGPP MPGHSAALHG 600 MTGPNLQVFG LPGQGLSLPM QRAPLVPVLG GPFMKSAMGF NACGAGGLME NMESARPYTS 660 KDPVQTMGTQ VLQNTGASSS INQTSSQCQP AKEGFEQSAL VQNNVQTSDV NGGKASANGN 720 EVGA

Sequence ? help Back to Top

Protein Sequence Length: 724 aa Download sequence

MPLSELYRLA KRRVDSNQDF EPGNDVFELV WENGQITTQG QPSRTRKEPT CNSLPSHCLP  60
SYTPKSRDKD IGYGTSSKTG KFGTVDSVVL NEIPMSVPSD EVGLSHDDVM MPWLNYPIDG  120
SLQHEYCPDF LPELSGVTVN DVSKSNNFAS NDKSSCSLLY RESNTNSVGY GASLEQRNGS  180
KIGSVVGGDV VRPRTGSSQL YPSSSQECQT SFPSFRSRVV DSIVDNTSSA ARHSVCSDSV  240
RVPSDGGFPS LKMQKKDTIP PSNSSNVINF SHFSRPAALV KANLQNIGTT TDSNVSSMER  300
IPIKDKGSAA NSNSPPKPVL IDSSSGLGKE TGTRCQIMPS GNDLKPSEAR PLEEPCAAKD  360
SEAVCQEDRA KNDINFSQIP CESATRALPD GEKNMEPIVA SSSVCSGNSV ERASDDPTHV  420
LKRKFRDTED SECHSEDVEE ESVGVKKTAL PRGAGSKRSR AAEVHNLSER RRRDRINEKM  480
RALQELIPNC NKVDKASMLD EAIEYLKTLQ LQVQIMSMGA GLCMPPMMLP AGMQHMHAPH  540
LAHFSSMGVG MGMGMGMGFG MGIPDMNGGS SGYPMIQVPP VQGAHFPGPP MPGHSAALHG  600
MTGPNLQVFG LPGQGLSLPM QRAPLVPVLG GPFMKSAMGF NACGAGGLME NMESARPYTS  660
KDPVQTMGTQ VLQNTGASSS INQTSSQCQP AKEGFEQSAL VQNNVQTSDV NGGKASANGN  720
EVGA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	469	474	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	2e-75	bHLH family protein