PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON69304.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ARF

Protein Properties

Length: 703aa MW: 76702.8 Da PI: 6.9156

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON69304.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.3	1.4e-23	121	222	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + +++ l PON69304.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--RAENGDL 215 89**************************996555555..89*******************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ PON69304.1 216 CVGIRRA 222 **997 PP
2	Auxin_resp	116.3	2.6e-38	290	373	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ as++++FevvY+Prast+eF+vk++ v++al+++++ GmRfkmafetedss++++ +Gt+++v+ +dp+rWp+S+Wr+L+ PON69304.1 290 AATLASNGQPFEVVYYPRASTPEFCVKAALVKAALQIRWCSGMRFKMAFETEDSSRISWfMGTISSVQVADPLRWPDSPWRLLQ 373 6899******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MITFMDSKEK MKEVEKCLDP QLWHACAGGM VQMPAVNAKV FYFPQGHAEH ACGPVDFRNS 60 PRVAPYILCR VSSIKFMADP ETDEVFAKLR LVPLGVNELG YEDDGIGGLN GSETQAKPAS 120 FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSADPPVQT ILAKDVHGET WKFRHIYRGT 180 PRRHLLTTGW STFVNHKKLV AGDSIVFLRA ENGDLCVGIR RAKRGIGGGP ESSSGWNPAG 240 GNCAVPYGGF SAFLRDEENK LLRNGNGNGS SLNGGLMGKG KVRPESVVEA ATLASNGQPF 300 EVVYYPRAST PEFCVKAALV KAALQIRWCS GMRFKMAFET EDSSRISWFM GTISSVQVAD 360 PLRWPDSPWR LLQVAWDEPD LLQNVKRVSP WLVELVSNMP AIHLSPFSPP RKKLRLPQNS 420 DFPLDGHIPI PTFPSNLLGH SNPFGCLSDN TPAGMQGARH AHFGLSLSDL HLNKLQPGLF 480 PVGLPLFDHG TAPAPTKFSN NAVNQKPSLN ENVSCLLTMS HATQTPKKPD DVKAPQLILF 540 GQPILTEQQI SLSCSGDTVS PVLTGNSSSD GNGDKAANFS DGSGSAIHQQ GLHERSSGEG 600 YQWYKDNRQE TEPNLETGHC KVFMESEDVG RTLDLSLLGS YDELYRKLAD MFGIENSKTL 660 SQALYRDGTG AVKHIGEEPF SDFTKTAKRL TILMDSGSDN VGM

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MITFMDSKEK MKEVEKCLDP QLWHACAGGM VQMPAVNAKV FYFPQGHAEH ACGPVDFRNS  60
PRVAPYILCR VSSIKFMADP ETDEVFAKLR LVPLGVNELG YEDDGIGGLN GSETQAKPAS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSADPPVQT ILAKDVHGET WKFRHIYRGT  180
PRRHLLTTGW STFVNHKKLV AGDSIVFLRA ENGDLCVGIR RAKRGIGGGP ESSSGWNPAG  240
GNCAVPYGGF SAFLRDEENK LLRNGNGNGS SLNGGLMGKG KVRPESVVEA ATLASNGQPF  300
EVVYYPRAST PEFCVKAALV KAALQIRWCS GMRFKMAFET EDSSRISWFM GTISSVQVAD  360
PLRWPDSPWR LLQVAWDEPD LLQNVKRVSP WLVELVSNMP AIHLSPFSPP RKKLRLPQNS  420
DFPLDGHIPI PTFPSNLLGH SNPFGCLSDN TPAGMQGARH AHFGLSLSDL HLNKLQPGLF  480
PVGLPLFDHG TAPAPTKFSN NAVNQKPSLN ENVSCLLTMS HATQTPKKPD DVKAPQLILF  540
GQPILTEQQI SLSCSGDTVS PVLTGNSSSD GNGDKAANFS DGSGSAIHQQ GLHERSSGEG  600
YQWYKDNRQE TEPNLETGHC KVFMESEDVG RTLDLSLLGS YDELYRKLAD MFGIENSKTL  660
SQALYRDGTG AVKHIGEEPF SDFTKTAKRL TILMDSGSDN VGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein