PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON68888.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 511aa MW: 57305.6 Da PI: 4.1932

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON68888.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.4	2.9e-07	257	305	2	47
SSS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 + W++eE+ + ++v + lG++ W++ ++ ++ Rt k+++s+++++ PON68888.1 257 QTWSEEEEHAFHQVVfsnpASLGKNFWNKLSAVFP-SRTKKEIVSYYFNV 305 68***********4444455666******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MVQKRPYDEE ETFKISFKHP RQAEECKQLV SFSESVFPED ESKISRTLDN GFTHADIKGD 60 EKFSGVMFTD LPKDGEDIET SAPASISSWP TSGTSEEDSL SEAPFHMSFL PEYFNPERTI 120 STLAHCEDIY SLLLNHPSSR KSVPVGPDHQ VEVPPWGQQG TGSISSSSYS SEVLKSELED 180 EKRLMGTCVI PMPDLTSSAY TDSIIGSGRT DCKCEDKGSF SCVRKHIMEA REELVKDIGP 240 ERFLELGFCD MGEQVAQTWS EEEEHAFHQV VFSNPASLGK NFWNKLSAVF PSRTKKEIVS 300 YYFNVFMLRK RCEQNRYDPT NIDSDNDEWQ GSDDFGDNEI GMTEDNDESV VESPVHGDDT 360 GNAQRQNDNL LQCDEDFADD ICDGNMNSDS NNGEIDRIAE IWPEKLDNCG SGPASNEKGD 420 QEVQDGSSTS SNTGVAPLRN HIESENGNRC SRDFGDDGFV LEHCDSKDWD LGYMTCSKKK 480 VDFLPTCNMI EEVFGEETQN HKVRDGKSLN F

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MVQKRPYDEE ETFKISFKHP RQAEECKQLV SFSESVFPED ESKISRTLDN GFTHADIKGD  60
EKFSGVMFTD LPKDGEDIET SAPASISSWP TSGTSEEDSL SEAPFHMSFL PEYFNPERTI  120
STLAHCEDIY SLLLNHPSSR KSVPVGPDHQ VEVPPWGQQG TGSISSSSYS SEVLKSELED  180
EKRLMGTCVI PMPDLTSSAY TDSIIGSGRT DCKCEDKGSF SCVRKHIMEA REELVKDIGP  240
ERFLELGFCD MGEQVAQTWS EEEEHAFHQV VFSNPASLGK NFWNKLSAVF PSRTKKEIVS  300
YYFNVFMLRK RCEQNRYDPT NIDSDNDEWQ GSDDFGDNEI GMTEDNDESV VESPVHGDDT  360
GNAQRQNDNL LQCDEDFADD ICDGNMNSDS NNGEIDRIAE IWPEKLDNCG SGPASNEKGD  420
QEVQDGSSTS SNTGVAPLRN HIESENGNRC SRDFGDDGFV LEHCDSKDWD LGYMTCSKKK  480
VDFLPTCNMI EEVFGEETQN HKVRDGKSLN F