PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON68798.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GRAS
Protein Properties Length: 722aa    MW: 81943.6 Da    PI: 5.3048
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON68798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS362.18e-1113517202374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lL++cA+av+s d++  ++lL++++e++sp+gd +qRla+yf+++L+ rl+  ++  y+ l ++ +s    ++ l+a++++  ++P+ ++s++ aN+
  PON68798.1 351 TTLLTQCAQAVASYDQRTSTQLLKQIREHSSPHGDENQRLAHYFANGLEVRLSA-GTPSYNPLGSNGAS---AADLLKAYQVYLTACPFKRMSNFYANR 445
                 689**************************************************9.77777777666666...9************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 +Il+  e+++r+HiiDf++ +G+QWp+L+q L++Rp+gpp+lR Tg++ p++g   +e++ +tg rLa+++e+++vpfe+n+ +a+++e++++e+L+++
  PON68798.1 446 TILKLSEKATRLHIIDFGVLYGFQWPCLIQRLSERPGGPPRLRFTGIEFPQPGfrPSERVDQTGLRLANYCERFNVPFEYNM-IAQKWETVRVEDLKLD 543
                 ****************************************************9*****************************.7*************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++E ++Vn+  ++++l+de+v  + +rd+vL+l+++++P+v+++   +  hn++ Fl+rf eal ++salfd++ea+l re+++r + E+e++gr+++n
  PON68798.1 544 RDEFTVVNCLDRMKNLPDETVMEDCPRDAVLRLIRRIEPDVFIHGVMNGTHNAPFFLTRFREALFHFSALFDMFEASLLREDQHRLMFEKEVFGRDVMN 642
                 *********************9999************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 vva eg +r+er et+++W+ r ++aGFk+v+l+ + +k ++ +++ ++ + + v+e+  ++++gWk+r   ++S+W+
  PON68798.1 643 VVAGEGVQRVERPETYKQWQVRNTRAGFKQVALDAELVKRVRKMVKCHYHRDFVVDEDGRWMFQGWKGRIFQAISCWQ 720
                 *************************************************999*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 722 aa     Download sequence    
MDTLFEDLHG GTMNKFRFEP DSHLVSPNQN LVHDYDEVND HEFIDPVFLP TNPDLHSEPS  60
PSSGSSSEGD SPESGEFSNN AIILKFINEI LMEEDLEAKP CMLQDCLALQ AAEKSFYDVI  120
GEKYPSSLNQ ILPCLMNKNL KSPHDNFVRS FSNDSSIGSS TSPGNWVDSS QSSDVQTSLV  180
ESPEDTLLAP YSYGEAQSLW GLGQVQGKAG FFLPNGSGEI FDLEGNLSLP LDSTEQGSTV  240
FGIPERYSSN SSDGSKGKKS HQRESGYDNP EQEGRSNKHS AVYPDFSEPS DIFDEVLLPK  300
PTKNSEFCSL DENNEDKPGQ QWRKEPKGSS SNGKRTRQKK RNSSREVVDL TTLLTQCAQA  360
VASYDQRTST QLLKQIREHS SPHGDENQRL AHYFANGLEV RLSAGTPSYN PLGSNGASAA  420
DLLKAYQVYL TACPFKRMSN FYANRTILKL SEKATRLHII DFGVLYGFQW PCLIQRLSER  480
PGGPPRLRFT GIEFPQPGFR PSERVDQTGL RLANYCERFN VPFEYNMIAQ KWETVRVEDL  540
KLDRDEFTVV NCLDRMKNLP DETVMEDCPR DAVLRLIRRI EPDVFIHGVM NGTHNAPFFL  600
TRFREALFHF SALFDMFEAS LLREDQHRLM FEKEVFGRDV MNVVAGEGVQ RVERPETYKQ  660
WQVRNTRAGF KQVALDAELV KRVRKMVKCH YHRDFVVDED GRWMFQGWKG RIFQAISCWQ  720
PA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-178GRAS family protein