PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON68795.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GRAS
Protein Properties Length: 624aa    MW: 71505.3 Da    PI: 6.0973
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON68795.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS366.83e-1122516223374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lL++cA+av+  d++ a++ L ++++++sp+gd++qRla+yf+++L+arl+++ + ly+al +se s    ++ l+a++++  ++P++++s+  aNq+
  PON68795.1 251 TLLTQCAQAVAGFDQRTANQQLRKVRQHSSPHGDAFQRLAHYFANGLEARLSGTRTALYSALVSSEMS---LADILKAYQVYITACPFFRMSFSFANQT 346
                 69**************************************************************9999...**************************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 I + +e+ + +HiiDf+i +G+QWp L+q L++ p+gpp+lRiTg++ p++g   +e++eet++rL+++++++ vp e+nv +a++++++++e+L++++
  PON68795.1 347 IWKLAENVKSIHIIDFGILYGFQWPELIQRLSQTPGGPPKLRITGIELPQPGfrPSEKVEETKRRLENYCKRFSVPSEYNV-IAQKWQTIRYEDLNIDR 444
                 ***************************************************9****************************9.7**************99 PP

        GRAS 199 ..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                   +E ++Vn+ ++l +++de+v ++++rd+vLkl+++++P+++++   +  +n++ F +rf  al +y alfd++++++pr++e r k E+++ gr+i+
  PON68795.1 445 erDELVVVNCLYRLRHIPDETVVMNNPRDTVLKLIRRINPDLFIHGVVNGTYNAPFFETRFKAALFHYYALFDMFDTTVPRQDEYRLKFEKAIYGRDIE 543
                 99************************************************************************************************* PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 nv aceg+er+er et+++W+ r ++aGFk++pl++++ + +k  +   +++ + ve + ++l++gWk+r ++++S+W+
  PON68795.1 544 NVMACEGSERVERPETYRQWQVRNMRAGFKQIPLDQEVFEAVKNTVYSSYDKDFVVERHGQWLLQGWKGRLIYALSCWK 622
                 **************************************************899*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 624 aa     Download sequence    
MDTLFEELTV SSIDDFNFNH GSESDLPHLS DSGQSSSLGS DGESSVSADS FNATLKYITE  60
MLMEEEDLER KASTLEDPLA LQAAEKSFYD VLGQNYPPSS DKGENLCSGY RFQTHVVQDS  120
GFDHIQSIAH FRGKAGETSS FSQMGKPQII DLESFEYNLL NEPKGKRNLL RAYGDNRDES  180
RRSKQLAVST DDSEPTEMFD RVLLCQGGTT KSDESNACQK ASKNEQTKGS GKTVRSMKKE  240
DNKTEVVDLW TLLTQCAQAV AGFDQRTANQ QLRKVRQHSS PHGDAFQRLA HYFANGLEAR  300
LSGTRTALYS ALVSSEMSLA DILKAYQVYI TACPFFRMSF SFANQTIWKL AENVKSIHII  360
DFGILYGFQW PELIQRLSQT PGGPPKLRIT GIELPQPGFR PSEKVEETKR RLENYCKRFS  420
VPSEYNVIAQ KWQTIRYEDL NIDRERDELV VVNCLYRLRH IPDETVVMNN PRDTVLKLIR  480
RINPDLFIHG VVNGTYNAPF FETRFKAALF HYYALFDMFD TTVPRQDEYR LKFEKAIYGR  540
DIENVMACEG SERVERPETY RQWQVRNMRA GFKQIPLDQE VFEAVKNTVY SSYDKDFVVE  600
RHGQWLLQGW KGRLIYALSC WKPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-180GRAS family protein