PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON68792.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GRAS
Protein Properties Length: 758aa    MW: 85534.8 Da    PI: 5.5074
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON68792.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS367.51.8e-1123827551373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL+ cA+avs++d + a++lL+++++++sp gd  qRla++f+++L+arla++++++     ++  s+ + se l+a++l    +P+ k++ + aN
  PON68792.1 382 LRTLLILCAQAVSADDRRTANELLKQIRQHSSPLGDGSQRLAHCFANGLEARLAGTGTGTQLY-YSTLLSNVKASEILKAYQLHLSSCPFKKMAIVFAN 479
                 5789***************************************************65555433.33444446799************************ PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 ++I++ +e+++ +Hi+Df+i +G+QWp L+q L++R++gpp+lRiTg++ p++g   +e++eetg+rL+k++e++gvpf++n+++++++e++++e++++
  PON68792.1 480 KMIMKVAEKATSLHIVDFGILYGFQWPILIQHLSKRAGGPPKLRITGIEFPQKGfrPAERIEETGRRLEKYCERFGVPFKYNAIASQNWETIRVEDIKI 578
                 *****************************************************9******************************999************ PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E++aVn+ ++ ++llde+v+++ +r+ vL+l+++++P ++v +  + ++n++ F++rf eal ++salfd l+++++re+eer + E+e+ gre++
  PON68792.1 579 DSNEVVAVNCLMRFKHLLDETVEVNCPRNVVLNLIRKMNPAIFVQSIANGSYNAPFFVTRFREALFHFSALFDVLDTNISRENEERLMFEKEFYGREAM 677
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 nv+aceg er+er et+++W+ r  +aGF+++pl+++ ++  +  l+k + + + ++e+s+++++gWk+r +++  +W
  PON68792.1 678 NVIACEGLERVERPETYKQWQVRNLRAGFQSLPLNQELMSAFREKLKKWYHKDFVIDEDSNWILQGWKGRIVYASACW 755
                 **************************************************888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 758 aa     Download sequence    
MIMDPSFNEY PDFTNGFKIE NQTIFPNSNE YNFNRLSPDF EFLDNSLNLY APPPDPDPGT  60
FIPTPSIDVS SVRESPFPST TEGTDGGSST PPSSVSPGGD SSSDENEFSE TVFKYINSIL  120
MEENMEEKPH MFYDPLDLQV TEKSFYDALG ERYPYSPNQS QIDQKVETPD SVFSGSSSEH  180
GGSSTSTSTS TSNSASSPQL VSDLGDHKPS SLQSSLPVDN NFQFDFLMAQ NLFRDSDSIS  240
LFQRGVEEAS KFLPKCNQLV IDLESHKFSP ELKREDVTVK VERENSPNGS RGRKNHERED  300
PDLEERSNKQ SAVYVDESEL SDMFDRVLLH TDHGCKQRGE TESGKSEASK NSQPNKQAAG  360
SNANGGKARG KKQGKKKETV DLRTLLILCA QAVSADDRRT ANELLKQIRQ HSSPLGDGSQ  420
RLAHCFANGL EARLAGTGTG TQLYYSTLLS NVKASEILKA YQLHLSSCPF KKMAIVFANK  480
MIMKVAEKAT SLHIVDFGIL YGFQWPILIQ HLSKRAGGPP KLRITGIEFP QKGFRPAERI  540
EETGRRLEKY CERFGVPFKY NAIASQNWET IRVEDIKIDS NEVVAVNCLM RFKHLLDETV  600
EVNCPRNVVL NLIRKMNPAI FVQSIANGSY NAPFFVTRFR EALFHFSALF DVLDTNISRE  660
NEERLMFEKE FYGREAMNVI ACEGLERVER PETYKQWQVR NLRAGFQSLP LNQELMSAFR  720
EKLKKWYHKD FVIDEDSNWI LQGWKGRIVY ASACWVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein