PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON68782.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

CO-like

Protein Properties

Length: 429aa MW: 46909.2 Da PI: 5.8169

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON68782.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.8	1.7e-06	46	87	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedCllee..Hkg..Htvvp 41 C++++ ++++ C d ++ +C++C ++ ++ H+++p PON68782.1 46 LLCDKCNGQPAIVRCVDEKMSMCQNCDWSGssCSStgHRRQP 87 68************************9888776446677665 PP
2	CCT	62.7	1.1e-21	373	416	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R++a++RY+eK+ktR F K+irY+sRKa+A++R+RvKGrFvk+ PON68782.1 373 RDKAKMRYNEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAG 416 899**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
METLCEFCGV VRAVVYCKSD FASLCLHCDA RVHSANLLSR RHQRSLLCDK CNGQPAIVRC 60 VDEKMSMCQN CDWSGSSCSS TGHRRQPLYF YTGCPSLAEF SNIFNSVLNG TSSGGFDGDW 120 GTSLGTITVN EDCISNGTLE PAKEAGQFGM VADSDDQSHP KLEPWTGSSS IVTPNPNCVP 180 YFQDQPAAFF PEESILSRGC SKLKDLRIHD GHDLFKSLNV DEVPMNFGNG NEIFNCSQGS 240 TTYPFEDGGM DCLLMEKNLS VTESNGPTES AIEASSSGQQ DYMGFQPPHL GGSANVVQAM 300 NGGSNCVLVN PTSSRNINLR FPAGQVHSVI SHSLSNITGE SSATDYQDCG ISPAFLTGES 360 WDSSLEASCP QARDKAKMRY NEKKKTRTFG KQIRYASRKA RADTRKRVKG RFVKAGEEYD 420 YDPQVTRDF

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

METLCEFCGV VRAVVYCKSD FASLCLHCDA RVHSANLLSR RHQRSLLCDK CNGQPAIVRC  60
VDEKMSMCQN CDWSGSSCSS TGHRRQPLYF YTGCPSLAEF SNIFNSVLNG TSSGGFDGDW  120
GTSLGTITVN EDCISNGTLE PAKEAGQFGM VADSDDQSHP KLEPWTGSSS IVTPNPNCVP  180
YFQDQPAAFF PEESILSRGC SKLKDLRIHD GHDLFKSLNV DEVPMNFGNG NEIFNCSQGS  240
TTYPFEDGGM DCLLMEKNLS VTESNGPTES AIEASSSGQQ DYMGFQPPHL GGSANVVQAM  300
NGGSNCVLVN PTSSRNINLR FPAGQVHSVI SHSLSNITGE SSATDYQDCG ISPAFLTGES  360
WDSSLEASCP QARDKAKMRY NEKKKTRTFG KQIRYASRKA RADTRKRVKG RFVKAGEEYD  420
YDPQVTRDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21880.1	8e-95	CO-like family protein