PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON68706.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 518aa MW: 57162.8 Da PI: 6.5098 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.9 | 4.9e-18 | 39 | 86 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt Ed +lv++v+++G g+W+++ + +g+ R++k+c++rw ++l PON68706.1 39 KGPWTTSEDAILVEYVRKHGEGNWNAVQKNLGLARCGKSCRLRWANHL 86 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 51 | 3.4e-16 | 92 | 135 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ ++++++ +lG++ W++ a+ ++ gRt++++k++w++ PON68706.1 92 KGSFTPEEERIIIELHSKLGNK-WARMASQLP-GRTDNEIKNYWNT 135 799*******************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 518 aa Download sequence |
MSNHMMINNE GADERAAAVA GTKTAEEEGG FRDGGSLKKG PWTTSEDAIL VEYVRKHGEG 60 NWNAVQKNLG LARCGKSCRL RWANHLRPNL KKGSFTPEEE RIIIELHSKL GNKWARMASQ 120 LPGRTDNEIK NYWNTRMKRR QRAGLPLYPH DIPVQYQNDN NQRHSSSSSS SFSSQLLSPS 180 HHHHHHSPKL PNNNYNFHHH HSVFHSRPSD NSAQLFTANN SGFALPICSS GFPFGSSPSS 240 SSALFNQRTH IPIPQTTLPN PSFRYNVPAG FIGSFGTLSS MVTGSAPYDP SAVEFHQVPS 300 SVSVNMVSEL PSTQTMPLQS TTPASSYISG GEGGEEFEFQ ESRGNNSGLL DALLFESQAL 360 SRNEKAKRKC SPVPAPPEKG KRFFPENHSA EEEEEEEEEE HTIGSESVLK NSGYENYGRT 420 ENFSTSCQSS IGIEQSEEPL DDDLMSLLNN FPTSMSVPDW YGGSGGNSKR ENLGVTSGYA 480 RRVEDVVAQD SSLVPPTTTG KHERSLDSCY WNNMPGIC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G32460.1 | 3e-75 | MYB family protein |