PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON68570.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

ARF

Protein Properties

Length: 674aa MW: 75093.2 Da PI: 6.238

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON68570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70	3.2e-22	126	226	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++ +++a+++ +++ ++l+ +d++g +W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + +++el PON68570.1 126 FCKTLTASDTSTHGGFSVLRRHADDClppldmsQQP--PWQELVATDLHGHEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFL--RGENGEL 220 99**************************964333..4459*********************************************..449999 PP EEEEE- CS B3 93 vvkvfr 98 +v+v+r PON68570.1 221 RVGVRR 226 ****97 PP
2	Auxin_resp	112.4	4.3e-37	252	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+st++ F+v+Y+Pr+s+seF v+v+k+++a+++k+svGmRfkm+fe+e+++err+sGt+vgv d+ ++ W nS+WrsLk PON68570.1 252 ASHAISTGTLFSVFYKPRTSRSEFLVSVNKYLEACNHKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDSTSSGWDNSEWRSLK 334 789******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 674 aa Download sequence
MAFSASNPSS KGAPPGTSDA LYKELWHACA GPLVTLPREG ERVYYFPQGH MEQLEASMHQ 60 GVEQQMPSFN LPPKILCKVV NVQLRAEMET DEVYAQITLL PEQDQTEVTS PDPPLTEPPR 120 CTVHSFCKTL TASDTSTHGG FSVLRRHADD CLPPLDMSQQ PPWQELVATD LHGHEWHFRH 180 IFRGQPRRHL LTTGWSVFVS SKKLVAGDAF IFLRGENGEL RVGVRRLMRQ PSNMPSSVIS 240 SHSMHLGVLA TASHAISTGT LFSVFYKPRT SRSEFLVSVN KYLEACNHKL SVGMRFKMRF 300 EGEEVPERRF SGTIVGVGDS TSSGWDNSEW RSLKVQWDEP SSILRPERVS PWELEPLVAT 360 PPPNSQPTQR NKRARPSVLP PPSSDLSVLG TWKSPGESPS AFSYCDPQRG QELYPSPQFN 420 SASKSNPHSF SGNSNLGAIS SNTMYWSNRV DAATESFSIN KDSGERRQNT GNGCRLFGIQ 480 LVDNSNLEDT SPVGALTGTF GDTQAVPSLD ADSEHSEPSN VNRVDHPSVS CDAEKSSLRS 540 PQELQSRQIR SCTKVHMQGI AVGRAVDLTR FDRYEDLLRK LEEMFDIQSE LCGSTKKWQV 600 VYTDDEDDMM MVGDDPWHEF CSMVRKIFIY TTEEVKMLSP KIKLPVNKDA KSGKQEFEVA 660 VNHDDQSSIV GPGC

Sequence ? help Back to Top

Protein Sequence Length: 674 aa Download sequence

MAFSASNPSS KGAPPGTSDA LYKELWHACA GPLVTLPREG ERVYYFPQGH MEQLEASMHQ  60
GVEQQMPSFN LPPKILCKVV NVQLRAEMET DEVYAQITLL PEQDQTEVTS PDPPLTEPPR  120
CTVHSFCKTL TASDTSTHGG FSVLRRHADD CLPPLDMSQQ PPWQELVATD LHGHEWHFRH  180
IFRGQPRRHL LTTGWSVFVS SKKLVAGDAF IFLRGENGEL RVGVRRLMRQ PSNMPSSVIS  240
SHSMHLGVLA TASHAISTGT LFSVFYKPRT SRSEFLVSVN KYLEACNHKL SVGMRFKMRF  300
EGEEVPERRF SGTIVGVGDS TSSGWDNSEW RSLKVQWDEP SSILRPERVS PWELEPLVAT  360
PPPNSQPTQR NKRARPSVLP PPSSDLSVLG TWKSPGESPS AFSYCDPQRG QELYPSPQFN  420
SASKSNPHSF SGNSNLGAIS SNTMYWSNRV DAATESFSIN KDSGERRQNT GNGCRLFGIQ  480
LVDNSNLEDT SPVGALTGTF GDTQAVPSLD ADSEHSEPSN VNRVDHPSVS CDAEKSSLRS  540
PQELQSRQIR SCTKVHMQGI AVGRAVDLTR FDRYEDLLRK LEEMFDIQSE LCGSTKKWQV  600
VYTDDEDDMM MVGDDPWHEF CSMVRKIFIY TTEEVKMLSP KIKLPVNKDA KSGKQEFEVA  660
VNHDDQSSIV GPGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	0.0	ARF family protein