PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON68219.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

TCP

Protein Properties

Length: 280aa MW: 28705.9 Da PI: 10.391

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON68219.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.7	8.4e-38	46	121	2	76
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eae 76 a+kk++++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ ++ PON68219.1 46 AVKKTPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFStLSV 121 78**************************************************************999998773222 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MSNTDVGGTN GVSNGALIDS NQRQQQQQQQ QQQTAVTASA VNGALAVKKT PSKDRHSKVD 60 GRGRRIRMPI ICAARVFQLT RELGHKSDGQ TIEWLLRQAE PSIIAATGTG TTPASFSTLS 120 VSVRGGAGAG LGGVSASLST SSANSVSLDH KPLLGPTPFI MGKRVRPDDG SGVGKDGHDG 180 GNDGVSVVGA TMGSMVGSGT TAPGGFWAPH FGQVWSFAAA PPEMVAQPAV SQQQSLFVQQ 240 QTIGEASAAR VGNYLPGHLN LLASLSGGPG SSGRREDDPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	7e-55	TCP family protein