PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON67830.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GATA
Protein Properties Length: 380aa    MW: 41612.1 Da    PI: 7.2877
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON67830.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA581.3e-18262296135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++C t kTp+WR gp g+ktLCnaCG++y++ +l
  PON67830.1 262 CQHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 296
                 *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MEAPELHNYI NNHQNNNVKT AMAAGGDHFA VEDLLDFSNE DVDAIATVDG AFNSSALTAG  60
NSTDSNSTQS TTHVLDTSCN SSSFSGCKPN GILPDHFGSR DFPDAHFSSD LCVPYDDLAE  120
LEWLSNFVEE SFSSEDLQKL HLISGIKARG PDESSDTTTR TQPNRAAAPI FNPDVSVPAK  180
ARSKRSRAPP CNWTSRLLHL SPTTSSSHPP PPPPQYEHVV VVSVPHAPAS TSTAKKAVKA  240
GPPKKKEAPD NGGPGAGEGR RCQHCATDKT PQWRTGPMGP KTLCNACGVR YKSGRLVPEY  300
RPAASPTFVL TKHSNSHRKV LELRRQKEML RSGVSQHQQQ PQFLPHHHHH HHHQSMMFDA  360
SNGEDYLIHQ HVGPDYRQMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.16e-88GATA family protein