PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON67672.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 618aa    MW: 68042.5 Da    PI: 5.0973
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON67672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS352.94.8e-1082516182374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  ++L++cA+ v+s+  e+a + L +l+e +s++gdp++R++++f+eAL +r++       ++ p+s+     s++ + +++++++++P+ kf+hltaNq
  PON67672.1 251 LKALIDCARLVESE-SERAVKSLIHLKESVSEQGDPTERVTFHFAEALYNRVSL------EKSPSSAMFAAASEDFTLSYNVLNDACPYSKFAHLTANQ 342
                 689********995.5677778889***************************98......334444444455789999********************* PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 aIlea+e+++++Hi+Df+i qG+QW+aLlqaLa+Rp g+p ++Ri g+ + + g   + +l +tg+rL++fA+ l+++fef++ + + +++l+ +++rv
  PON67672.1 343 AILEATERASKIHIVDFGIVQGVQWAALLQALATRPTGKPtKIRISGIPALALGksPAASLFATGNRLSEFAKLLELKFEFEP-ILSPISELNESSFRV 440
                 ************************************66666*********9888889999***********************.799************ PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E+laVn++lql++lldes    +   + L+l ksl++k+v++ e ea++n+  F++rf +al+yy+a+f+sle kl r+s er  vEr+l+gr+i 
  PON67672.1 441 EEDEVLAVNFMLQLYNLLDESPMAVQ---TALRLAKSLNAKIVTLGEYEASLNRVGFMNRFKNALRYYTAVFESLEPKLNRDSPERLQVERVLFGRRIG 536
                 ******************99998888...9********************************************************************* PP

        GRAS 296 nvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
                  vv  e    +rer+e  e+W+  +e++ F+pv+ls++a++qak ll +++ s  +++ e+s  ++ l W++ pL++vS+Wr
  PON67672.1 537 CVVGPEVPGtKRERMEDREQWKILMEDSDFEPVALSHYAVSQAKILLWNYDySSLFSLVESSPGFLsLAWNEVPLLTVSSWR 618
                 ****9987668****************************************9999***999988888**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 618 aa     Download sequence    
MAYMCTDSGN LMAIAQQVIK QKQQQEQQQQ QSHHHHHQQQ QLTGLTPFSL SPWTTTHNSS  60
ISNTPNLGFG LTGPGFPDPF QVAGGSDTGE PGFQFPHVEH HHSTTGFRFS DFGAGPGGEF  120
DSDEWMDSIM GGGDSTDSSN LPSGCDAWQS NADFVIYGSD PFSAAAACPS RLSVPWTSPS  180
DLNRVLFTEN QKSPNPLQPQ VSPWIPPQAP PSSPTMVSKD SKSANPPLLR KNDVVGVSTS  240
SPEIESAPPL LKALIDCARL VESESERAVK SLIHLKESVS EQGDPTERVT FHFAEALYNR  300
VSLEKSPSSA MFAAASEDFT LSYNVLNDAC PYSKFAHLTA NQAILEATER ASKIHIVDFG  360
IVQGVQWAAL LQALATRPTG KPTKIRISGI PALALGKSPA ASLFATGNRL SEFAKLLELK  420
FEFEPILSPI SELNESSFRV EEDEVLAVNF MLQLYNLLDE SPMAVQTALR LAKSLNAKIV  480
TLGEYEASLN RVGFMNRFKN ALRYYTAVFE SLEPKLNRDS PERLQVERVL FGRRIGCVVG  540
PEVPGTKRER MEDREQWKIL MEDSDFEPVA LSHYAVSQAK ILLWNYDYSS LFSLVESSPG  600
FLSLAWNEVP LLTVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein